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BD02T64_scaffold_1446

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1446_1
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FYE2_9GAMM
BD02T64_scaffold_1446_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215..715)
DNA (501bp) protein (167aa)
Probably colicin V production protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK74_9GAMM
colicin V production protein
Probably colicin V production protein {ECO:0000313|EMBL:CBL45216.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1446_3
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(798..1451)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZME7_SHEVD
Sporulation-like protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
sporulation domain-containing protein
BD02T64_scaffold_1446_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1494..2795)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000375361D
folylpolyglutamate synthase
Folylpolyglutamate synthase {ECO:0000313|EMBL:AHL76031.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
BD02T64_scaffold_1446_5
Marinobacter sp. AK21, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2802..3674)
DNA (873bp) protein (291aa)
acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CQQ3_9ALTE rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
BD02T64_scaffold_1446_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3762..4559)
DNA (798bp) protein (266aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=83406 species="Ba
Tryptophan synthase alpha chain n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK70_9GAMM rbh
BD02T64_scaffold_1446_7
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4572..5792)
DNA (1221bp) protein (407aa)
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Tryptophan synthase beta chain n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21IZ0_SACD2
BD02T64_scaffold_1446_8
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5785..6402)
DNA (618bp) protein (206aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Pseudomonas sp. GM55 RepID=J2TCG3_9PSED
BD02T64_scaffold_1446_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6516..7343)
DNA (828bp) protein (276aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KF93_PSEPG rbh
BD02T64_scaffold_1446_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7446..10574)
DNA (3129bp) protein (1043aa)
peptigoglycan-binding protein LysM n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030ED01B
Peptigoglycan-binding protein LysM {ECO:0000313|EMBL:EZH77691.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleo
Tfp pilus assembly protein FimV-like protein
BD02T64_scaffold_1446_11
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10816..11838)
DNA (1023bp) protein (341aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9A7_ALKEH
BD02T64_scaffold_1446_12
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11888..12967)
DNA (1080bp) protein (360aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP2_NEPCE
BD02T64_scaffold_1446_13
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13024..13689)
DNA (666bp) protein (222aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N207_PSEU6
leuD; 3-isopropylmalate dehydratase small subunit
leuD; 3-isopropylmalate dehydratase small subunit , LeuD Tax=GWC1_Azotobacter_66_9_curated
BD02T64_scaffold_1446_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13700..15115)
DNA (1416bp) protein (472aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK60_9GAMM rbh
leuC; 3-isopropylmalate dehydratase large subunit
BD02T64_scaffold_1446_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15261..16136
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK53_9GAMM rbh
transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBL45195.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1446_16
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16152..16721)
DNA (570bp) protein (190aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Mor
Carbonic anhydrase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6APQ8_DESPS
carbonic anhydrase
BD02T64_scaffold_1446_17
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16910..18103)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C4Y8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR30620.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
BD02T64_scaffold_1446_18
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18226..18525)
DNA (300bp) protein (100aa)
Anti-anti-sigma regulatory factor n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SPR4_HAHCH
anti-anti-sigma regulatory factor
Anti-anti-sigma regulatory factor {ECO:0000313|EMBL:ABC27360.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuen
BD02T64_scaffold_1446_19
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18660..19064)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C853_ACAM1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW27737.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
BD02T64_scaffold_1446_20
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19120..20301)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00036B4780
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADJ27255.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococ
BD02T64_scaffold_1446_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20316..21425)
DNA (1110bp) protein (370aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK47_9GAMM
aroC; Chorismate synthase
BD02T64_scaffold_1446_22
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21507..22472)
DNA (966bp) protein (322aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK46_9GAMM
adenine-specific DNA methylase
BD02T64_scaffold_1446_23
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23117..24556
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK43_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45185.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1446_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24575..26245
DNA (1671bp) protein (557aa)
Acyl-CoA dehydrogenase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK42_9GAMM rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CBL45184.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1446_25
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26475..27662
DNA (1188bp) protein (396aa)
Acyl dehydratase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK41_9GAMM
maoC; acyl dehydratase
Acyl dehydratase {ECO:0000313|EMBL:CBL45183.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying 25 items

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