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BD02T64_scaffold_1461

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1461_1
Pseudomonas moraviensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..532)
DNA (531bp) protein (177aa)
Nuclease n=1 Tax=Pseudomonas moraviensis R28 RepID=V8REN8_9PSED
Nuclease {ECO:0000313|EMBL:ETF10133.1}; TaxID=1395516 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas moraviensis R28-S.;"
nuclease
BD02T64_scaffold_1461_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(663..878)
DNA (216bp) protein (72aa)
50S ribosomal protein L31 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL31_COLP3
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychre
BD02T64_scaffold_1461_3
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1293..1820
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI0003645FDB
fimbrial pilin related signal peptide protein
Uridylate kinase {ECO:0000313|EMBL:EAZ99350.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ELB17.;
BD02T64_scaffold_1461_4
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1822..2319
DNA (498bp) protein (166aa)
Type IV fimbrial biogenesis protein PilV n=2 Tax=Nitrosococcus oceani RepID=Q3J8W7_NITOC
Type IV fimbrial biogenesis protein PilV
Type IV fimbrial biogenesis protein PilV {ECO:0000313|EMBL:ABA58729.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitro
BD02T64_scaffold_1461_5
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2316..3158
DNA (843bp) protein (281aa)
putative Tfp pilus assembly protein PilW n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025569CA
Uncharacterized protein {ECO:0000313|EMBL:KHL71218.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
type IV minor pilin protein, PilW
BD02T64_scaffold_1461_6
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3193..3729
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI000374427B
type IV fimbrial biogenesis protein PilX
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI85209.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
BD02T64_scaffold_1461_7
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3765..8246
DNA (4482bp) protein (1494aa)
Fimbrial assembly protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY98_NITHN rbh
fimbrial assembly protein rbh
Fimbrial assembly protein {ECO:0000313|EMBL:ADE14081.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="N
BD02T64_scaffold_1461_8
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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8302..8721
DNA (420bp) protein (140aa)
Tfp pilus assembly protein PilE n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6S9_METMM
Tfp pilus assembly protein PilE
Tfp pilus assembly protein PilE {ECO:0000313|EMBL:AEG00550.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomo
BD02T64_scaffold_1461_9

Not on your lists

8785..11082
DNA (2298bp) protein (766aa)
primosome assembly protein PriA n=1 Tax=Pseudomonas stutzeri RepID=UPI00036C7F49
Uncharacterized protein {ECO:0000313|EMBL:KKN68253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
primosomal protein N'
BD02T64_scaffold_1461_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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11207..12964
DNA (1758bp) protein (586aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=83406 species="Bacteria; Prote
Arginine--tRNA ligase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM99_9GAMM rbh
argS; arginyl-tRNA synthetase
BD02T64_scaffold_1461_11
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13020..13535
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00037EB7C4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD46755.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
BD02T64_scaffold_1461_12
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13663..14214
DNA (552bp) protein (184aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=314287 specie
ATP-dependent protease subunit HslV n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPN6_9GAMM
hslV; peptidase component of the HslUV protease (heat shock protein)
BD02T64_scaffold_1461_13
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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14297..15646
DNA (1350bp) protein (450aa)
ATP-dependent protease n=1 Tax=Endozoicomonas elysicola RepID=UPI000364BB16
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=305900 species="Bacteria; Proteobac
ATP-dependent protease ATP-binding subunit HslU
BD02T64_scaffold_1461_14
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15680..16054
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIA8_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV25268.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
BD02T64_scaffold_1461_15
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16189..16962
DNA (774bp) protein (258aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002559457
ubiquinone/menaquinone biosynthesis methyltransferase
BD02T64_scaffold_1461_16
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16966..17652
DNA (687bp) protein (229aa)
Sterol-binding domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVA3_NITHN
sterol-binding domain-containing protein
Sterol-binding domain protein {ECO:0000313|EMBL:ADE15453.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus ha
BD02T64_scaffold_1461_17
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17664..19316
DNA (1653bp) protein (551aa)
ubiB; 2-polyprenylphenol 6-hydroxylase (EC:1.14.13.-)
Probable protein kinase UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; EC=2.7.-.- {ECO:0000255|HAMAP-Rule:MF_00414};; Ubiquinone biosynthesis protein UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; TaxID=349521 spec
ubiquinone biosynthesis protein UbiB n=1 Tax=Hahella ganghwensis RepID=UPI00037E200A
BD02T64_scaffold_1461_18
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19401..19730
DNA (330bp) protein (110aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DMQ9_9GAMM
phosphoribosyl-ATP pyrophosphatase
BD02T64_scaffold_1461_19
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19743..19970
DNA (228bp) protein (76aa)
Sec-independent protein translocase protein TatA n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=TATA_SACD2 rbh
twin-arginine translocation protein, TatA/E family
Sec-independent protein translocase protein TatA {ECO:0000255|HAMAP-Rule:MF_00236}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophag
BD02T64_scaffold_1461_20
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20109..20510
DNA (402bp) protein (134aa)
Sec-independent protein translocase protein TatB n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM90_9GAMM
tatB; Sec-independent protein translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma p
BD02T64_scaffold_1461_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20548..21312
DNA (765bp) protein (255aa)
Sec-independent protein translocase protein TatC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM89_9GAMM
tatC; Sec-independent protein translocase
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1461_22
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21358..21795)
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteo
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Marinobacterium stanieri RepID=UPI000255A8D4
D-tyrosyl-tRNA deacylase
BD02T64_scaffold_1461_23
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21973..22932
DNA (960bp) protein (320aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad
Proline iminopeptidase n=2 Tax=Pseudomonas stutzeri RepID=A4VGD4_PSEU5 rbh
pip; proline iminopeptidase
BD02T64_scaffold_1461_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23170..23625)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHP4_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44336.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1461_25
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23708..26590)
DNA (2883bp) protein (961aa)
Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain, ATP-binding n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHP3_9GAMM
biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding
Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain, ATP-binding {ECO:0000313|EMBL:CBL44335.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobact
BD02T64_scaffold_1461_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26603..28330)
DNA (1728bp) protein (576aa)
Propionyl-CoA carboxylase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHP2_9GAMM
propionyl-CoA carboxylase
Propionyl-CoA carboxylase {ECO:0000313|EMBL:CBL44334.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying 26 items

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