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BD02T64_scaffold_1613

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1613_1
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..969
DNA (969bp) protein (323aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B235_9ALTE
BD02T64_scaffold_1613_2
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1062..2372)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K7AF63_9ALTE
hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ93721.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
BD02T64_scaffold_1613_3
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2363..2701)
DNA (339bp) protein (113aa)
Putative lipoprotein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YL26_OLEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL17453.1}; TaxID=393595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax bork
BD02T64_scaffold_1613_4
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2917..3576
DNA (660bp) protein (220aa)
DNA-binding response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8D4_9GAMM
DNA-binding response regulator {ECO:0000313|EMBL:EAQ66577.1}; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
transcriptional regulator
BD02T64_scaffold_1613_5
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3632..4990
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" s
Sensor histidine kinase n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8D5_9GAMM
sensor histidine kinase
BD02T64_scaffold_1613_6
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5083..5937)
DNA (855bp) protein (285aa)
LysR family transcriptional regulator n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248472E
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABW27273.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina
BD02T64_scaffold_1613_7
unknown

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6070..6669
DNA (600bp) protein (200aa)

This feature has no annotations

BD02T64_scaffold_1613_8

Not on your lists

6795..7475
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YR22_OLEAN rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL68690.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1613_9
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7552..8700)
DNA (1149bp) protein (383aa)
acdA; long-chain specific acyl-CoA dehydrogenase (EC:1.3.99.13)
Long-chain specific acyl-CoA dehydrogenase, mitochondrial (LCAD) n=2 Tax=Marinobacter RepID=H8W606_MARHY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERS09750.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
BD02T64_scaffold_1613_10

Not on your lists

comp(8806..9798)
DNA (993bp) protein (331aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037AB1BD
Uncharacterized protein {ECO:0000313|EMBL:KKN77202.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AraC family transcriptional regulator
BD02T64_scaffold_1613_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10025..10672)
DNA (648bp) protein (216aa)
Fe/S biogenesis protein NfuA n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKB5_9GAMM
hypothetical protein
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.
BD02T64_scaffold_1613_12
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10867..14559
DNA (3693bp) protein (1231aa)
Methionine synthase n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2JM58_9PSED
Methionine synthase {ECO:0000313|EMBL:ENA37261.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB00
methionine synthase
BD02T64_scaffold_1613_13
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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14567..15895
DNA (1329bp) protein (443aa)
Multidrug transporter MATE n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HTU9_9GAMM rbh
Multidrug transporter MATE {ECO:0000313|EMBL:ERS13132.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax
multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase superfamily rbh
BD02T64_scaffold_1613_14
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16109..17770
DNA (1662bp) protein (554aa)
sulfite reductase (EC:1.8.7.1)
Sulfite reductase (Ferredoxin) n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AC60_PSEF1
Sulfite reductase {ECO:0000313|EMBL:KFX69335.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis
BD02T64_scaffold_1613_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17754..18254
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF27 RepID=U9QNX1_PSEAI
hypothetical protein
Oxidoreductase {ECO:0000313|EMBL:ETD47688.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRF
BD02T64_scaffold_1613_16
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18438..19622
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHH8_NEPCE
Glutathione-regulated potassium-efflux system protein KefB {ECO:0000313|EMBL:KEA62038.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marin
sodium/hydrogen antiporter
BD02T64_scaffold_1613_17
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19619..20632)
DNA (1014bp) protein (338aa)
yhfP; Putative quinone oxidoreductase YhfP (EC:1.6.5.-)
Putative quinone oxidoreductase YhfP {ECO:0000313|EMBL:CDF83362.1}; EC=1.6.5.- {ECO:0000313|EMBL:CDF83362.1};; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
Putative oxidoreductase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WXW4_PSEDE
BD02T64_scaffold_1613_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20634..21695)
DNA (1062bp) protein (354aa)
Peptidase family S49 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKB3_9GAMM rbh
sohB; peptidase family S49
Peptidase family S49 {ECO:0000313|EMBL:CBL45255.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1613_19
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21915..22568)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI0003823326
Cation/multidrug efflux pump {ECO:0000313|EMBL:EAW31868.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143
hypothetical protein
BD02T64_scaffold_1613_20
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22604..23443)
DNA (840bp) protein (280aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1245935 species="Bacteria; C
NAD(+) diphosphatase (EC:3.6.1.22)
NUDIX hydrolase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FH98_9CLOT
BD02T64_scaffold_1613_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23493..25211)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKB0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL45252.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1613_22
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25441..26229)
DNA (789bp) protein (263aa)
DNA polymerase III, epsilon subunit n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBD5_9GAMM
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EAW31865.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium H
DNA polymerase III subunit epsilon
BD02T64_scaffold_1613_23
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26291..27142)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKA7_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45249.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1613_24
Alteromonas sp. SN2, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27401..28183
DNA (783bp) protein (261aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=1 Tax=Alteromonas sp. (strain SN2) RepID=F5Z409_ALTSS
hydroxyacylglutathione hydrolase
BD02T64_scaffold_1613_25
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28256..29806
DNA (1551bp) protein (517aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FZB6_9GAMM rbh
membrane-bound lytic murein transglycosylase D
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:AJD48378.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" s
BD02T64_scaffold_1613_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29817..31562)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKA4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45246.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1613_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31790..33646
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002557034 rbh
Putative substrate-binding transport protein {ECO:0000313|EMBL:ELQ15588.1}; TaxID=1205750 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
ABC transporter substrate-binding protein
BD02T64_scaffold_1613_28
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33666..35471
DNA (1806bp) protein (602aa)
Peptide ABC transporter periplasmic peptide-binding protein n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CPB1_9ALTE
Peptide ABC transporter periplasmic peptide-binding protein {ECO:0000313|EMBL:EMP55481.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Mari
family 5 extracellular solute-binding protein
BD02T64_scaffold_1613_29

Not on your lists

35485..36570
DNA (1086bp) protein (362aa)
microcin C ABC transporter permease YejB n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035F6255
Uncharacterized protein {ECO:0000313|EMBL:KKN99469.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
yejB; Inner membrane ABC transporter permease protein yejB
BD02T64_scaffold_1613_30
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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36574..37590
DNA (1017bp) protein (339aa)
Putative ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Vibrio nigripulchritudo SOn1 RepID=U4JN57_9VIBR rbh
peptide/nickel transport system permease
Peptide/nickel transport system permease protein {ECO:0000313|EMBL:BAI71063.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;
Displaying items 1-30 of 33 in total

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