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BD02T64_scaffold_1616

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1616_1
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1684
DNA (1683bp) protein (561aa)
fadD2; Long chain fatty-acid-CoA ligase (EC:6.2.1.3) rbh
Long chain fatty-acid-CoA ligase {ECO:0000313|EMBL:CBL46955.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBL46955.1};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobac
Long chain fatty-acid-CoA ligase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ63_9GAMM rbh
BD02T64_scaffold_1616_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1858..5829
DNA (3972bp) protein (1324aa)
ATP-dependent helicase {ECO:0000313|EMBL:CBL46956.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL46956.1};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN
hrpA; ATP-dependent helicase (EC:3.6.1.-)
ATP-dependent helicase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ64_9GAMM
BD02T64_scaffold_1616_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5879..6919
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000368783F rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABQ25793.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter
BD02T64_scaffold_1616_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6968..8107
DNA (1140bp) protein (380aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:CBL46957.1}; EC=2.3.1.41 {ECO:0000313|EMBL:CBL46957.1};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="g
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ65_9GAMM
BD02T64_scaffold_1616_5
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8127..8867
DNA (741bp) protein (247aa)
ABC transporter n=1 Tax=Halomonas sp. KM-1 RepID=UPI0002880B2B
ABC transporter {ECO:0000313|EMBL:KGE76835.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
hypothetical protein
BD02T64_scaffold_1616_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8964..9281)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ71_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46963.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1616_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9647..10834
DNA (1188bp) protein (396aa)
Response regulator receiver n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ72_9GAMM
Response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:CBL46964.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1616_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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10916..11506
DNA (591bp) protein (197aa)
Anti-anti-sigma regulatory factor n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ73_9GAMM
Anti-anti-sigma regulatory factor
Anti-anti-sigma regulatory factor {ECO:0000313|EMBL:CBL46965.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_1616_9
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11503..11967)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCS0_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
hypothetical protein
BD02T64_scaffold_1616_10
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11964..12884)
DNA (921bp) protein (307aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670};; TaxID=717774 species="Bacteria; Proteobact
Transaldolase n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2K1D1_MARM1
transaldolase
BD02T64_scaffold_1616_11
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13012..14016)
DNA (1005bp) protein (335aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodo
tRNA-dihydrouridine synthase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L4Q0_9PROT rbh
TIM-barrel protein, yjbN family rbh
BD02T64_scaffold_1616_12
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14600..15580
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YZY0_DESAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ50935.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
BD02T64_scaffold_1616_13
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15632..17140)
DNA (1509bp) protein (503aa)
Monooxygenase, flavin-binding family n=1 Tax=Oleispira antarctica RB-8 RepID=R4YL08_OLEAN
Monooxygenase, flavin-binding family {ECO:0000313|EMBL:CCK75242.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB
hypothetical protein
BD02T64_scaffold_1616_14
unknown

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17366..18229
DNA (864bp) protein (288aa)

This feature has no annotations

BD02T64_scaffold_1616_15
Leptospira licerasiae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18215..19033)
DNA (819bp) protein (273aa)
KR domain protein n=2 Tax=Leptospira licerasiae RepID=I0XV66_9LEPT
KR domain protein {ECO:0000313|EMBL:EIE02774.1}; TaxID=1049972 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira licerasiae serovar Varillal str. VAR 010
short-chain dehydrogenase/reductase sdr
BD02T64_scaffold_1616_16

Not on your lists

comp(19133..19750)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=M4U7Y0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN62931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1616_17
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19909..22281
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000374723D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDL56372.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
BD02T64_scaffold_1616_18
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22586..23446
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI0003694E6D
Uncharacterized protein {ECO:0000313|EMBL:KEI71606.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas ely
hypothetical protein
BD02T64_scaffold_1616_19
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23672..25150
DNA (1479bp) protein (493aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000313|EMBL:CBL46799.1};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID
Glutamate--tRNA ligase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPQ7_9GAMM
BD02T64_scaffold_1616_20
unknown

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25627..25824
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 20 items

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