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ACD49_7

Alias: ACD49_4141.76082.23

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_7_1
unknown

Not on your lists

3..713
DNA (711bp) protein (237aa)
Secreted protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYE3_9PROT (db=UNIREF evalue=7.0e-08 bit_score=60.8 identity=28.57 coverage=82.2784810126582)
Concanavalin A-like lectins/glucanases (db=superfamily db_id=SSF49899 from=73 to=219 evalue=7.9e-11 interpro_id=IPR008985 interpro_description=Concanavalin A-like lectin/glucanase)
Secreted protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYE3_9PROT Tax=ACD49
ACD49_7_2

Not on your lists

857..1936
DNA (1080bp) protein (360aa)
sortase family protein
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB (db=UNIREF evalue=8.0e-12 bit_score=75.1 identity=33.55 coverage=40.2777777777778)
seg (db=Seg db_id=seg from=26 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
ACD49_7_3
ACD49, Gracilibacteria, Bacteria

Not on your lists

1960..2265
DNA (306bp) protein (102aa)
seg (db=Seg db_id=seg from=28 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=57)
seg 28..44 Tax=ACD49
ACD49_7_4
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(2277..3014)
DNA (738bp) protein (246aa)
seg (db=Seg db_id=seg from=169 to=182)
seg 169..182 Tax=ACD49
ACD49_7_5
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(3016..3465)
DNA (450bp) protein (150aa)
hypothetical protein
seg (db=Seg db_id=seg from=22 to=42)
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=148 evalue=3.3e-31)
SPOUT_MTase (db=HMMPfam db_id=PF02590 from=2 to=148 evalue=7.1e-26 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
ACD49_7_6
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(3530..3724)
DNA (195bp) protein (65aa)
3530..3724 - (rbs_motif=TTTAA rbs_spacer=15bp)
hypothetical protein Tax=ACD49
ACD49_7_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(3794..6199)
DNA (2406bp) protein (802aa)
Translation initiation factor IF-2 n=2 Tax=Desulfitobacterium hafniense RepID=IF2_DESHY (db=UNIREF evalue=2.0e-133 bit_score=480.0 identity=37.43 coverage=84.5386533665835)
infB; translation initiation factor IF-2
infB; translation initiation factor IF-2
seg (db=Seg db_id=seg from=26 to=64)
ACD49_7_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(6323..6913)
DNA (591bp) protein (197aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=165 to=196)
seg (db=Seg db_id=seg from=138 to=151)
ACD49_7_9
unknown

Not on your lists

comp(7051..7722)
DNA (672bp) protein (224aa)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP9_9CLOT (db=UNIREF evalue=7.0e-45 bit_score=183.0 identity=44.44 coverage=94.1964285714286)
trmD; transfer RNA (guanine-N(1)-)-methyltransferase
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=213 evalue=8.5e-49)
no description (db=Gene3D db_id=G3DSA:3.40.1280.10 from=1 to=160 evalue=2.2e-35)
ACD49_7_10
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(7728..8837)
DNA (1110bp) protein (370aa)
peptidylprolyl isomerase, FKBP-type; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] (db=KEGG evalue=3.0e-21 bit_score=106.0 identity=51.49 coverage=26.4864864864865)
seg (db=Seg db_id=seg from=2 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=79)
PEPTIDYLPROLYL ISOMERASE (db=HMMPanther db_id=PTHR10516:SF15 from=113 to=211 evalue=5.6e-19)
ACD49_7_11
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(8883..9866)
DNA (984bp) protein (328aa)
holA; DNA polymerase III subunit delta
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=33 to=182 evalue=2.1e-12 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=90 to=203 evalue=1.5e-07)
no description (db=Gene3D db_id=G3DSA:1.10.8.60 from=139 to=223 evalue=9.4e-05)
ACD49_7_12
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(9869..10138)
DNA (270bp) protein (90aa)
heavy metal transport/detoxification protein (db=KEGG evalue=1.0e-09 bit_score=65.5 identity=39.08 coverage=92.2222222222222)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=4 to=69 evalue=4.9e-06 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
heavy metal transport/detoxification protein alias=ACD49_4141.76082.23G0012,ACD49_4141.76082.23_12,ACD49_C00007G00012 id=69220 tax=ACD49 species=Thioalkalivibrio sp. K90mix genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
heavy metal transport/detoxification protein Tax=ACD49
ACD49_7_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

10270..11487
DNA (1218bp) protein (406aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=316 to=338)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=262)
ACD49_7_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

11554..11754
DNA (201bp) protein (67aa)
11554..11754 + (rbs_motif=TTTTA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_7_15
ACD49, Gracilibacteria, Bacteria

Not on your lists

11756..11986
DNA (231bp) protein (77aa)
YcfA/nrd intein domain (db=superfamily db_id=SSF54786 from=5 to=75 evalue=6.7e-08 interpro_id=IPR015146 interpro_description=Ribonucleotide reductase, stirrup)
no description (db=Gene3D db_id=G3DSA:3.30.920.30 from=5 to=75 evalue=0.00033)
YcfA/nrd intein domain Tax=ACD49
ACD49_7_16
unknown

Not on your lists

12109..13020
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI (db=UNIREF evalue=4.0e-14 bit_score=82.4 identity=31.71 coverage=60.1973684210526)
diguanylate cyclase
seg (db=Seg db_id=seg from=284 to=298)
coiled-coil (db=Coil db_id=coil from=112 to=133 evalue=NA)
ACD49_7_17

Not on your lists

13092..14099
DNA (1008bp) protein (336aa)
Cation efflux protein
Cation efflux protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C709_9PLAN (db=UNIREF evalue=3.0e-48 bit_score=196.0 identity=35.42 coverage=97.6190476190476)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=211)
transmembrane_regions (db=TMHMM db_id=tmhmm from=168 to=187)
ACD49_7_18
unknown

Not on your lists

14291..15865
DNA (1575bp) protein (525aa)
Sensor protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZD0_9PROT (db=UNIREF evalue=1.0e-83 bit_score=314.0 identity=36.84 coverage=91.8095238095238)
bvgS_[H]; Phytochrome, two-component sensor histidine kinase; Cyanobacterial phytochrome B
coiled-coil (db=Coil db_id=coil from=253 to=277 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ACD49_7_19
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(15918..16829)
DNA (912bp) protein (304aa)
seg (db=Seg db_id=seg from=23 to=36)
PGBD-like (db=superfamily db_id=SSF47090 from=71 to=142 evalue=5.0e-06 interpro_id=IPR002477 interpro_description=Peptidoglycan binding-like GO=Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:1.10.101.10 from=71 to=152 evalue=0.00017 interpro_id=IPR002477 interpro_description=Peptidoglycan binding-like GO=Biological Process: metabolic process (GO:0008152))
seg 23..36 Tax=ACD49
ACD49_7_20
unknown

Not on your lists

16953..17993
DNA (1041bp) protein (347aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y692_9FIRM (db=UNIREF evalue=3.0e-40 bit_score=169.0 identity=36.36 coverage=82.9971181556196)
seg (db=Seg db_id=seg from=220 to=232)
seg (db=Seg db_id=seg from=16 to=30)
ACD49_7_21
unknown

Not on your lists

18019..18627
DNA (609bp) protein (203aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFA4_9EURY (db=UNIREF evalue=2.0e-38 bit_score=162.0 identity=43.72 coverage=94.5812807881773)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] (db=KEGG evalue=2.0e-15 bit_score=85.5 identity=32.02 coverage=86.6995073891626)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=196 evalue=1.1e-14 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=1 to=191 evalue=5.6e-07)
ACD49_7_22
unknown

Not on your lists

18712..19371
DNA (660bp) protein (220aa)
Hydrolase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTJ0_9SPHI (db=UNIREF evalue=5.0e-45 bit_score=184.0 identity=46.76 coverage=95.9090909090909)
HD domain protein
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=20 to=165 evalue=5.9e-06)
Hydrolase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTJ0_9SPHI Tax=ACD49
ACD49_7_23
unknown

Not on your lists

19399..21132
DNA (1734bp) protein (578aa)
Lipid A export ATP-binding/permease protein MsbA
Heavy metal tolerance protein n=2 Tax=Paracoccidioides brasiliensis RepID=C1H7P4_PARBA (db=UNIREF evalue=2.0e-50 bit_score=204.0 identity=35.31 coverage=52.076124567474)
seg (db=Seg db_id=seg from=166 to=177)
seg (db=Seg db_id=seg from=248 to=265)
ACD49_7_24
ACD49, Gracilibacteria, Bacteria

Not on your lists

21153..21572
DNA (420bp) protein (140aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=2 to=134 evalue=5.8e-08 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) Tax=ACD49
ACD49_7_25
ACD49, Gracilibacteria, Bacteria

Not on your lists

21594..23525
DNA (1932bp) protein (644aa)
ABC transporter ATP-binding component
seg (db=Seg db_id=seg from=65 to=84)
seg (db=Seg db_id=seg from=321 to=331)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD49_7_26
unknown

Not on your lists

23577..24674
DNA (1098bp) protein (366aa)
3-dehydroquinate synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FYB0_9FIRM (db=UNIREF evalue=1.0e-50 bit_score=204.0 identity=39.22 coverage=81.6939890710383)
3-dehydroquinate synthase (EC:4.2.3.4)
seg (db=Seg db_id=seg from=3 to=12)
Dehydroquinate synthase-like (db=superfamily db_id=SSF56796 from=1 to=365 evalue=3.5e-66)
ACD49_7_27
ACD49, Gracilibacteria, Bacteria

Not on your lists

24750..26573
DNA (1824bp) protein (608aa)
Glucosamine-fructose-6-phosphate aminotransferase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIX0_9BACT (db=UNIREF evalue=5.0e-138 bit_score=495.0 identity=41.65 coverage=99.6710526315789)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR10937 from=2 to=607 evalue=3.2e-207)
ACD49_7_28

Not on your lists

26594..27028
DNA (435bp) protein (145aa)
6-pyruvoyl tetrahydropterin synthase
Tetrahydrobiopterin biosynthesis enzymes-like (db=superfamily db_id=SSF55620 from=1 to=142 evalue=7.1e-35)
PTPS (db=HMMPfam db_id=PF01242 from=2 to=142 evalue=2.0e-32 interpro_id=IPR007115 interpro_description=6-pyruvoyl tetrahydropterin synthase-related GO=Molecular Function: 6-pyruvoyltetrahydropterin synthase activity (GO:0003874), Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:3.30.479.10 from=3 to=142 evalue=2.2e-28)
ACD49_7_29
ACD49, Gracilibacteria, Bacteria

Not on your lists

27132..27512
DNA (381bp) protein (127aa)
hypothetical protein (db=KEGG evalue=2.0e-10 bit_score=68.2 identity=26.19 coverage=98.4251968503937)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=89)
ACD49_7_30
unknown

Not on your lists

comp(27509..28486)
DNA (978bp) protein (326aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y836_9FIRM (db=UNIREF evalue=2.0e-39 bit_score=166.0 identity=34.29 coverage=76.3803680981595)
seg (db=Seg db_id=seg from=33 to=46)
seg (db=Seg db_id=seg from=17 to=30)
Displaying items 1-30 of 68 in total

View Taxonomy