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BSR_inoc_135743

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_135743_1
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(1..675)
DNA (675bp) protein (225aa)
pbpA; penicillin-binding protein 1A (EC:2.4.1.129 3.4.-.-)
Penicillin-binding protein 1A {ECO:0000313|EMBL:AGR78093.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AGR78093.1};; EC=3.4.-.- {ECO:0000313|EMBL:AGR78093.1};; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
Penicillin-binding protein 1A n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8EW07_ARCB4
BSR_inoc_135743_2
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(677..1366)
DNA (690bp) protein (230aa)
ABC transporter, ATP-binding protein n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8EW06_ARCB4
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABV68129.1}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
BSR_inoc_135743_3
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(1366..2841)
DNA (1476bp) protein (492aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000255|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000255|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000255|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000255|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000255|HAMAP-Rule:MF_01038};; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HQ10_9PROT
phosphoglyceromutase
BSR_inoc_135743_4
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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3004..3969
DNA (966bp) protein (322aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=3 Tax=Arcobacter butzleri RepID=MRAY_ARCB4
BSR_inoc_135743_5
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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3970..5130
DNA (1161bp) protein (387aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|SAAS:SAAS00084342};; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase n=1 Tax=Arcobacter butzleri JV22 RepID=E6L3U1_9PROT
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthase
BSR_inoc_135743_trna_1
unknown

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5172..5244
DNA (73bp)
transferRNA Phe
BSR_inoc_135743_trna_2
unknown

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5258..5331
DNA (74bp)
transferRNA Thr
BSR_inoc_135743_trna_3
unknown

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5395..5476
DNA (82bp)
transferRNA Tyr
BSR_inoc_135743_trna_4
unknown

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5491..5564
DNA (74bp)
transferRNA Gly
BSR_inoc_135743_6
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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5776..6984
DNA (1209bp) protein (403aa)
Elongation factor Tu n=4 Tax=Arcobacter butzleri RepID=EFTU_ARCB4
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
BSR_inoc_135743_7
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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6994..7161
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6K2_ARCNC
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
BSR_inoc_135743_trna_5
unknown

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7199..7271
DNA (73bp)
transferRNA Trp
BSR_inoc_135743_8
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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7348..7530
DNA (183bp) protein (61aa)
Protein translocase subunit SecE n=3 Tax=Arcobacter butzleri RepID=A8EW00_ARCB4
secE; preprotein translocase SecYEG, SecE subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
BSR_inoc_135743_9
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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7542..8069
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=1 Tax=Arcobacter sp. L RepID=G2HYZ6_9PROT
transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter sp. L.;"
BSR_inoc_135743_10
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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8170..8595
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=4 Tax=Arcobacter butzleri RepID=RL11_ARCB4
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
BSR_inoc_135743_11
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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8661..9359
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=4 Tax=Arcobacter butzleri RepID=RL1_ARCB4
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
BSR_inoc_135743_12
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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9516..10004
DNA (489bp) protein (163aa)
50S ribosomal protein L10 n=4 Tax=Arcobacter butzleri RepID=RL10_ARCB4
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
BSR_inoc_135743_13
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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10055..10426
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=4 Tax=Arcobacter butzleri RepID=RL7_ARCB4
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
BSR_inoc_135743_14
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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10591..14736
DNA (4146bp) protein (1382aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=6 Tax=Arcobacter butzleri RepID=RPOB_ARCB4
BSR_inoc_135743_15
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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14729..19255
DNA (4527bp) protein (1509aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HPZ8_9PROT
BSR_inoc_135743_16
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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19284..19670
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HPZ7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV68115.1}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
BSR_inoc_135743_17
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19694..19981
DNA (288bp) protein (96aa)
YCII-related protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6J2_ARCNC
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:ADG94262.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
BSR_inoc_135743_18
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(20005..21345)
DNA (1341bp) protein (447aa)
Diguanylate cyclase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BHW7_9HELI
Diguanylate cyclase, possibly sensing intracellular metabolites (GGDEF & CBS domain) {ECO:0000313|EMBL:EHP30119.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
diguanylate cyclase
BSR_inoc_135743_19
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(21440..22630)
DNA (1191bp) protein (397aa)
M23/M37 family peptidase n=1 Tax=Arcobacter butzleri JV22 RepID=E6L756_9PROT
M23/M37 family peptidase {ECO:0000313|EMBL:EFU68846.1}; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
zinc metallopeptidase, M23 family
BSR_inoc_135743_20
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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22707..23480
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HPG7_9PROT
putative peptidoglycan L,D-transpeptidase, ErfK/YbiS/YcfS/YnhG family
Putative peptidoglycan L,D-transpeptidase, ErfK/YbiS/YcfS/YnhG family {ECO:0000313|EMBL:AGR77921.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
Displaying 25 items

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