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RifSed_csp2_16ft_3_scaffold_6648

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_6648_1

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comp(3..254)
DNA (252bp) protein (84aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JIX6_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38484.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
TIR protein
RifSed_csp2_16ft_3_scaffold_6648_2
bacterium UASB270, Bacteria

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comp(251..823)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00036508D5
SEFIR domain protein {ECO:0000313|EMBL:GAK61110.1}; species="Bacteria.;" source="bacterium UASB270.;"
WD repeat-containing protein
RifSed_csp2_16ft_3_scaffold_6648_3

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comp(873..3089)
DNA (2217bp) protein (739aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JB29_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39309.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
RifSed_csp2_16ft_3_scaffold_6648_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3289..4056
DNA (768bp) protein (256aa)
RecA-superfamily ATPase possibly involved in signal transduction Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX01_METHD
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ72729.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RecA-superfamily ATPase possibly involved in signal transduction
RifSed_csp2_16ft_3_scaffold_6648_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4075..4740
DNA (666bp) protein (222aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=TPIS_METBU
RifSed_csp2_16ft_3_scaffold_6648_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4740..5576
DNA (837bp) protein (279aa)
Rhomboid family protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMA2_METZD
Putative membrane protein {ECO:0000313|EMBL:KCZ71566.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rhomboid family protein
RifSed_csp2_16ft_3_scaffold_6648_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5576..6115
DNA (540bp) protein (180aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA nucleotidyltransferase Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVY5_METMA
tRNA nucleotidyltransferase
RifSed_csp2_16ft_3_scaffold_6648_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6133..7749)
DNA (1617bp) protein (539aa)
Thermosome, alpha subunit Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXX0_METMA
Thermosome subunit {ECO:0000313|EMBL:KCZ71569.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Heat shock protein 60 family chaperone GroEL
RifSed_csp2_16ft_3_scaffold_6648_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7848..12374)
DNA (4527bp) protein (1509aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3K8_FERPA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_6648_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12524..13054)
DNA (531bp) protein (177aa)
Nitroreductase Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ32_METZD
nitroreductase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_6648_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(13047..13382)
DNA (336bp) protein (112aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_6648_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(13379..13759)
DNA (381bp) protein (127aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_6648_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13839..14480
DNA (642bp) protein (214aa)
2, 5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase {ECO:0000313|EMBL:KCZ72384.1}; EC=1.1.1.302 {ECO:0000313|EMBL:KCZ72384.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-amino-6-(5-phosphoribosylamino)uracil reductase Tax=Methanolobus psychrophilus R15 RepID=K4MQW6_9EURY
5-amino-6-(5-phosphoribosylamino)uracil reductase
Displaying 13 items

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