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CG01_land_8_20_14_3_00_Euryarchaeota_38_12_curated

CG01_land_8_20_14_3_00_Archaea_38_1

In projects: CG01_land_8_20_14_3_00 | CG_2014_genomes_from_metagenomes | CG_2014_505_non-redundant_genomes | archaea_ggkbase

Consensus taxonomy: Archaea

Metagenomic Context

Parent: CG01_land_8_20_14_3_00_Archaea_38_12 Manually curated genome
Original version: CG01_land_8_20_14_3_00_Archaea_38_12

Properties

Avg. coverage: 1.00 Longest contig: 14.25 Kbp Bin length: 1.46 Mbp GC content: 37.66 %

Contigs count: 512 Features count: 1962 rRNAs count: 0 tRNAs count: 23

Genome completeness

near complete RP 29 / 55 MC: 6 BSCG 23 / 51 MC: 1 ASCG 33 / 38 MC: 1

Displaying items 301-350 of 512 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
CG01_land_8_20_14_3.00_scaffold_68437_c	3	1591 bp	37.52	1.00	96.17
CG01_land_8_20_14_3.00_scaffold_10505_c Phylum: Euryarchaeota (66.67%)	3	3586 bp	37.81	1.00	97.30
CG01_land_8_20_14_3.00_scaffold_18672_c Domain: Bacteria (66.67%)	3	2558 bp	37.29	1.00	94.18
CG01_land_8_20_14_3.00_scaffold_23902_c	3	2115 bp	38.72	1.00	67.38
CG01_land_8_20_14_3.00_scaffold_45520_c	3	1828 bp	38.40	1.00	97.32
CG01_land_8_20_14_3.00_scaffold_23179_c	3	2287 bp	33.45	1.00	96.28
CG01_land_8_20_14_3.00_scaffold_45017_c	3	1674 bp	36.74	1.00	57.17
CG01_land_8_20_14_3.00_scaffold_62825_c Phylum: Euryarchaeota (66.67%)	3	1214 bp	37.73	1.00	91.93
CG01_land_8_20_14_3.00_scaffold_18100_c Phylum: Euryarchaeota (66.67%)	3	2542 bp	36.78	1.00	91.11
CG01_land_8_20_14_3.00_scaffold_18433_c	3	2632 bp	37.92	1.00	77.51
CG01_land_8_20_14_3.00_scaffold_36009_c Phylum: Euryarchaeota (66.67%)	3	1606 bp	36.49	1.00	81.82
CG01_land_8_20_14_3.00_scaffold_59506_c Species: Oryzias javanicus (50%)	2	1440 bp	44.24	1.00	92.50
CG01_land_8_20_14_3.00_scaffold_42475_c Species: Thermoplasmatales archaeon SCGC AB-539-C06 (50%)	2	1448 bp	36.60	1.00	99.45
CG01_land_8_20_14_3.00_scaffold_19097_c Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)	2	2525 bp	36.48	1.00	96.71
CG01_land_8_20_14_3.00_scaffold_53885_c Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)	2	1259 bp	37.73	1.00	99.84
CG01_land_8_20_14_3.00_scaffold_30680_c Species: Pyrococcus abyssi (50%)	2	1864 bp	32.89	1.00	100.11
CG01_land_8_20_14_3.00_scaffold_43086_c Species: uncultured organism (50%)	2	1527 bp	40.34	1.00	87.62
CG01_land_8_20_14_3.00_scaffold_46971_c Species: Candidatus Methanoperedens nitroreducens (50%)	2	1428 bp	37.39	1.00	96.01
CG01_land_8_20_14_3.00_scaffold_33827_c Species: Thermoplasmatales archaeon SCGC AB-539-C06 (50%)	2	1787 bp	41.91	1.00	99.72
CG01_land_8_20_14_3.00_scaffold_48171_c Species: uncultured miscellaneous Crenarchaeota group (50%)	2	1301 bp	35.90	1.00	95.93
CG01_land_8_20_14_3.00_scaffold_38718_c	2	1442 bp	39.11	1.00	47.43
CG01_land_8_20_14_3.00_scaffold_34253_c Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (50%)	2	1800 bp	37.22	1.00	24.67
CG01_land_8_20_14_3.00_scaffold_72546_c Species: Methanosaeta harundinacea (50%)	2	1022 bp	37.18	1.00	88.65
CG01_land_8_20_14_3.00_scaffold_32173_c Species: Aciduliprofundum sp. MAR08-339 (50%)	2	1776 bp	34.57	1.00	56.76
CG01_land_8_20_14_3.00_scaffold_71481_c Species: RBG_16_RIF03_38_11_curated (50%)	2	1002 bp	40.42	1.00	97.31
CG01_land_8_20_14_3.00_scaffold_8281_c Species: uncultured archaeon (50%)	2	4440 bp	36.55	1.00	99.59
CG01_land_8_20_14_3.00_scaffold_25261_c Species: Methanocaldococcus sp. JH146 (50%)	2	2171 bp	36.30	1.00	91.62
CG01_land_8_20_14_3.00_scaffold_24046_c Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)	2	2103 bp	37.47	1.00	63.20
CG01_land_8_20_14_3.00_scaffold_44544_c	2	1488 bp	31.65	1.00	47.98
CG01_land_8_20_14_3.00_scaffold_47372_c Species: CG_Aenigma_01 (50%)	2	1463 bp	35.27	1.00	99.66
CG01_land_8_20_14_3.00_scaffold_34955_c Species: Methanocella paludicola (50%)	2	1714 bp	38.56	1.00	90.67
CG01_land_8_20_14_3.00_scaffold_46597_c Species: uncultured archaeon GZfos9E5 (50%)	2	1460 bp	33.84	1.00	90.21
CG01_land_8_20_14_3.00_scaffold_72130_c	2	1458 bp	32.65	1.00	47.94
CG01_land_8_20_14_3.00_scaffold_12366_c Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	3180 bp	37.14	1.00	82.74
CG01_land_8_20_14_3.00_scaffold_54089_c Species: RBG_16_Elusimicrobia_66_12_curated (50%)	2	1317 bp	43.81	1.00	100.23
CG01_land_8_20_14_3.00_scaffold_76601_c Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)	2	1065 bp	39.06	1.00	91.27
CG01_land_8_20_14_3.00_scaffold_63558_c Species: marine sediment metagenome (50%)	2	1128 bp	40.87	1.00	100.27
CG01_land_8_20_14_3.00_scaffold_31437_c Species: marine sediment metagenome (50%)	2	1854 bp	37.32	1.00	100.16
CG01_land_8_20_14_3.00_scaffold_83206_c Species: Pelotomaculum thermopropionicum (50%)	2	918 bp	38.78	1.00	96.73
CG01_land_8_20_14_3.00_scaffold_67561_c Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)	2	1107 bp	41.37	1.00	102.98
CG01_land_8_20_14_3.00_scaffold_31763_c Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)	2	1563 bp	36.72	1.00	76.39
CG01_land_8_20_14_3.00_scaffold_12661_c Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)	2	3223 bp	41.02	1.00	95.69
CG01_land_8_20_14_3.00_scaffold_59390_c	2	1062 bp	33.71	1.00	81.36
CG01_land_8_20_14_3.00_scaffold_49201_c Species: RBG_13_Aminicenantes_63_10_curated (50%)	2	1174 bp	40.46	1.00	99.40
CG01_land_8_20_14_3.00_scaffold_19054_c Species: RIFOXYA1_FULL_Bacteriovorax_38_20_curated (50%)	2	2434 bp	40.35	1.00	95.65
CG01_land_8_20_14_3.00_scaffold_27612_c Species: RBG_13_Euryarchaeota_31_8_curated (50%)	2	2024 bp	37.65	1.00	90.12
CG01_land_8_20_14_3.00_scaffold_48925_c Species: Thaumarchaeota archaeon N4 (50%)	2	1257 bp	26.49	1.00	54.18
CG01_land_8_20_14_3.00_scaffold_67691_c Species: RBG_13_Deltaproteobacteria_47_9_curated (50%)	2	966 bp	39.65	1.00	100.31
CG01_land_8_20_14_3.00_scaffold_50160_c Species: Aciduliprofundum boonei (50%)	2	1398 bp	36.12	1.00	32.83
CG01_land_8_20_14_3.00_scaffold_15825_c Species: RBG_13_Euryarchaeota_57_23_curated (50%)	2	2765 bp	40.33	1.00	98.30

Displaying items 301-350 of 512 in total

CG01_land_8_20_14_3_00_Euryarchaeota_38_12_curated

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

CG01_land_8_20_14_3_00_Euryarchaeota_38_12_curated

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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