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CG01_land_8_20_14_3_00_Euryarchaeota_38_12_curated

CG01_land_8_20_14_3_00_Archaea_38_1

In projects: CG01_land_8_20_14_3_00 | CG_2014_genomes_from_metagenomes | CG_2014_505_non-redundant_genomes | archaea_ggkbase

Consensus taxonomy: Archaea

Metagenomic Context

Parent: CG01_land_8_20_14_3_00_Archaea_38_12 Manually curated genome
Original version: CG01_land_8_20_14_3_00_Archaea_38_12

Properties

Avg. coverage: 1.00 Longest contig: 14.25 Kbp Bin length: 1.46 Mbp GC content: 37.66 %

Contigs count: 512 Features count: 1962 rRNAs count: 0 tRNAs count: 23

Genome completeness

near complete RP 29 / 55 MC: 6 BSCG 23 / 51 MC: 1 ASCG 33 / 38 MC: 1

Displaying items 351-400 of 512 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
CG01_land_8_20_14_3.00_scaffold_57643_c Species: Methanobacterium formicicum (50%)	2	1203 bp	38.32	1.00	73.82
CG01_land_8_20_14_3.00_scaffold_37657_c Species: RBG_13_Euryarchaeota_31_8_curated (50%)	2	1688 bp	39.75	1.00	100.06
CG01_land_8_20_14_3.00_scaffold_76856_c Species: Methanospirillum hungatei (50%)	2	996 bp	35.44	1.00	71.39
CG01_land_8_20_14_3.00_scaffold_65623_c Species: Methanosphaerula palustris (50%)	2	1180 bp	35.51	1.00	100.17
CG01_land_8_20_14_3.00_scaffold_41484_c Species: BJP_IG2069_Desfulfarculales_53_13 (50%)	2	1393 bp	43.93	1.00	85.93
CG01_land_8_20_14_3.00_scaffold_18784_c Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)	2	2563 bp	41.01	1.00	97.62
CG01_land_8_20_14_3.00_scaffold_48676_c Species: RBG_16_Zixibacteria_40_9_curated (50%)	2	1332 bp	37.16	1.00	103.38
CG01_land_8_20_14_3.00_scaffold_56980_c Species: marine sediment metagenome (50%)	2	1048 bp	42.27	1.00	100.19
CG01_land_8_20_14_3.00_scaffold_74686_c Species: RBG_16_Euryarchaeota_62_10_curated (100%)	2	887 bp	42.39	1.00	99.44
CG01_land_8_20_14_3.00_scaffold_63450_c Species: Halothermothrix orenii (50%)	2	1124 bp	37.63	1.00	89.68
CG01_land_8_20_14_3.00_scaffold_70561_c	2	1098 bp	32.42	1.00	88.52
CG01_land_8_20_14_3.00_scaffold_46959_c Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1433 bp	40.61	1.00	95.88
CG01_land_8_20_14_3.00_scaffold_33047_c Species: Aciduliprofundum boonei (50%)	2	1631 bp	38.44	1.00	92.52
CG01_land_8_20_14_3.00_scaffold_33814_c Species: Gemmatimonas aurantiaca (50%)	2	1812 bp	35.15	1.00	56.13
CG01_land_8_20_14_3.00_scaffold_81767_c Species: Methanocaldococcus fervens (50%)	2	725 bp	37.10	1.00	88.14
CG01_land_8_20_14_3.00_scaffold_43683_c Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)	2	1513 bp	38.60	1.00	99.54
CG01_land_8_20_14_3.00_scaffold_33825_c Species: RBG_13_Euryarchaeota_31_8_curated (50%)	2	1647 bp	42.50	1.00	98.18
CG01_land_8_20_14_3.00_scaffold_63059_c Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1114 bp	38.15	1.00	85.10
CG01_land_8_20_14_3.00_scaffold_17609_c Species: Natrinema sp. J7-2 (50%)	2	2608 bp	38.04	1.00	92.48
CG01_land_8_20_14_3.00_scaffold_67909_c Species: RBG_13_Nitrospirae_39_12_curated (50%)	2	1153 bp	33.48	1.00	81.18
CG01_land_8_20_14_3.00_scaffold_141281_c Species: CG_Micra_06 (50%)	2	1250 bp	37.12	1.00	56.64
CG01_land_8_20_14_3.00_scaffold_55466_c Species: RBG_16_Euryarchaeota_62_10_curated (50%)	2	1263 bp	36.42	1.00	81.47
CG01_land_8_20_14_3.00_scaffold_65216_c Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)	2	1168 bp	40.24	1.00	89.13
CG01_land_8_20_14_3.00_scaffold_13536_c Species: CG_Aenigma_01 (100%)	2	2864 bp	35.93	1.00	93.65
CG01_land_8_20_14_3.00_scaffold_47237_c Species: RBG_16_Euryarchaeota_62_10_curated (50%)	2	1451 bp	36.80	1.00	85.80
CG01_land_8_20_14_3.00_scaffold_17215_c Species: Desulfosporosinus acidiphilus (50%)	2	2663 bp	38.34	1.00	99.25
CG01_land_8_20_14_3.00_scaffold_26779_c Species: Aciduliprofundum sp. MAR08-339 (50%)	2	2064 bp	32.56	1.00	82.41
CG01_land_8_20_14_3.00_scaffold_32015_c Species: uncultured archaeon (50%)	2	1827 bp	38.75	1.00	100.00
CG01_land_8_20_14_3.00_scaffold_35905_c Species: Methanocaldococcus sp. JH146 (50%)	2	1748 bp	32.89	1.00	70.02
CG01_land_8_20_14_3.00_scaffold_63174_c Species: Candidatus Methanomassiliicoccus intestinalis (50%)	2	1130 bp	38.23	1.00	83.36
CG01_land_8_20_14_3.00_scaffold_80207_c Species: RIFOXYA2_FULL_Elusimicrobia_53_38_curated (50%)	2	1003 bp	34.50	1.00	55.33
CG01_land_8_20_14_3.00_scaffold_42902_c Species: CG_Woesearch_01 (50%)	2	1514 bp	31.70	1.00	93.92
CG01_land_8_20_14_3.00_scaffold_49006_c Species: BJP_IG2102_Methanoregula_52_95 (50%)	2	1403 bp	32.57	1.00	66.07
CG01_land_8_20_14_3.00_scaffold_45219_c Species: RBG_13_Euryarchaeota_31_8_curated (50%)	2	1422 bp	38.54	1.00	94.94
CG01_land_8_20_14_3.00_scaffold_64524_c Species: CG_Micra_05 (50%)	2	1147 bp	34.09	1.00	52.31
CG01_land_8_20_14_3.00_scaffold_22056_c Species: Melioribacter roseus (50%)	2	1977 bp	39.10	1.00	90.59
CG01_land_8_20_14_3.00_scaffold_65270_c Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)	2	929 bp	41.12	1.00	99.14
CG01_land_8_20_14_3.00_scaffold_74960_c Species: Candidatus Methanomassiliicoccus intestinalis (50%)	2	981 bp	36.39	1.00	99.08
CG01_land_8_20_14_3.00_scaffold_44404_c Species: marine sediment metagenome (50%)	2	1525 bp	38.82	1.00	100.13
CG01_land_8_20_14_3.00_scaffold_44066_c Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)	2	1534 bp	40.16	1.00	72.16
CG01_land_8_20_14_3.00_scaffold_54345_c Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (50%)	2	1337 bp	44.43	1.00	99.85
CG01_land_8_20_14_3.00_scaffold_49593_c Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)	2	1345 bp	36.73	1.00	89.00
CG01_land_8_20_14_3.00_scaffold_30547_c Species: Methanothermococcus okinawensis (50%)	2	1851 bp	40.30	1.00	99.68
CG01_land_8_20_14_3.00_scaffold_55505_c Species: Methanobacterium formicicum (50%)	2	1044 bp	34.39	1.00	83.33
CG01_land_8_20_14_3.00_scaffold_30540_c Species: CG_Elusi_02 (50%)	2	1818 bp	36.47	1.00	66.50
CG01_land_8_20_14_3.00_scaffold_82925_c Species: Methanothermus fervidus (50%)	2	942 bp	36.94	1.00	41.08
CG01_land_8_20_14_3.00_scaffold_17701_c Species: uncultured marine group II/III euryarchaeote AD1000_26_F05 (50%)	2	2653 bp	38.37	1.00	96.12
CG01_land_8_20_14_3.00_scaffold_33398_c Species: RBG_13_Aminicenantes_64_14_curated (50%)	2	1803 bp	40.04	1.00	15.81
CG01_land_8_20_14_3.00_scaffold_48553_c Species: Methanohalobium evestigatum (50%)	2	1139 bp	38.81	1.00	97.45
CG01_land_8_20_14_3.00_scaffold_57771_c Species: Candidatus Methanoperedens nitroreducens (50%)	2	1264 bp	32.91	1.00	83.54

Displaying items 351-400 of 512 in total

CG01_land_8_20_14_3_00_Euryarchaeota_38_12_curated

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

CG01_land_8_20_14_3_00_Euryarchaeota_38_12_curated

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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