ggKbase home page

cg2_3.0_scaffold_2987_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2987_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..783)
DNA (783bp) protein (261aa)
seg 98..115 Tax=CG_Rhodof_02
seg 98..115 id=17543 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
cg2_3.0_scaffold_2987_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

908..1726
DNA (819bp) protein (273aa)
glucose-1-phosphate cytidylyltransferase; K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] Tax=CG_Rhodof_02
glucose-1-phosphate cytidylyltransferase n=1 Tax=Methylotenera RepID=UPI00037D7B4E rbh
glucose-1-phosphate cytidylyltransferase
cg2_3.0_scaffold_2987_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1785..2546
DNA (762bp) protein (254aa)
id=4400834 Tax=CG_Rhodof_02
cg2_3.0_scaffold_2987_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2506..3063
DNA (558bp) protein (186aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_2987_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3057..4169
DNA (1113bp) protein (371aa)
rfbG; CDP-glucose-4,6-dehydratase (EC:4.2.1.45); K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] Tax=CG_Rhodof_02
CDP-glucose 4,6-dehydratase n=1 Tax=Pseudomonas fluorescens EGD-AQ6 RepID=U1V0Q5_PSEFL rbh
CDP-glucose 4,6-dehydratase
cg2_3.0_scaffold_2987_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4166..4666
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1W6_9GAMM rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_2987_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4669..5211
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1W7_9GAMM rbh
Uncharacterized protein Tax=CG_Rhodof_02
cg2_3.0_scaffold_2987_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5321..5575
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000373D7AE rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_2987_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5559..7166
DNA (1608bp) protein (536aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124Y7_POLSJ rbh
DegT/DnrJ/EryC1/StrS aminotransferase; K12452 CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase Tax=CG_Rhodof_02
DegT/DnrJ/EryC1/StrS aminotransferase
cg2_3.0_scaffold_2987_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7332..7631
DNA (300bp) protein (100aa)
DNA polymerase, beta domain protein region n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AAC0_ALKEH rbh
DNA polymerase subunit beta Tax=CG_Rhodof_02
DNA polymerase subunit beta
cg2_3.0_scaffold_2987_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7628..8140
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI000380B17E rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_2987_c_12

Not on your lists

8146..8295
DNA (150bp) protein (50aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DZL0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD99133.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipopolysaccharide biosynthesis protein RfbH
cg2_3.0_scaffold_2987_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8312..9334
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000373E540 rbh
polysaccharide biosynthesis protein CapD Tax=CG_Rhodof_02
pseB; bifunctional UDP-N-acetylglucosamine 4,6-dehydratase/UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 5-epimerase
cg2_3.0_scaffold_2987_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9331..10161
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000364964E rbh
hypothetical protein Tax=CG_Rhodof_02
cg2_3.0_scaffold_2987_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10175..11998
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00038009CB rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_2987_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12013..12885
DNA (873bp) protein (291aa)
NAD-dependent epimerase/dehydratase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Rhodof_02
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036352CC rbh
NAD-dependent epimerase/dehydratase
cg2_3.0_scaffold_2987_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12857..13951
DNA (1095bp) protein (365aa)
N-acylneuraminate-9-phosphate synthase (EC:2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=CG_Rhodof_02
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036E1F66 rbh
N-acetylneuraminate synthase
cg2_3.0_scaffold_2987_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13948..14613
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00038147D9 rbh
family 2 glycosyl transferase Tax=CG_Rhodof_02
family 2 glycosyl transferase
cg2_3.0_scaffold_2987_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14638..15804)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Fusobacterium periodonticum D10 RepID=K1GHG4_9FUSO rbh
polysaccharide biosynthesis protein Tax=CG_Rhodof_02
polysaccharide biosynthesis protein
cg2_3.0_scaffold_2987_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15968..17203)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B628_9FIRM rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
Displaying 20 items

View Taxonomy