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cg2_3.0_scaffold_3607_c

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3607_c_trna_1
unknown

Not on your lists

comp(120..193)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_3607_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210..1220)
DNA (1011bp) protein (337aa)
farnesyltranstransferase (EC:2.5.1.29); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=CG_Rhodof_02
farnesyltranstransferase (EC:2.5.1.29)
Farnesyltranstransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z02_RHOFD rbh
cg2_3.0_scaffold_3607_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1356..1667
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Limnohabitans RepID=UPI0002EEAE9A rbh
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=CG_Rhodof_02
rplU; 50S ribosomal protein L21
cg2_3.0_scaffold_3607_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1680..1940
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Variovorax paradoxus RepID=UPI000380FC47 rbh
rpmA; 50S ribosomal protein L27 Tax=CG_Rhodof_02
rpmA; 50S ribosomal protein L27
cg2_3.0_scaffold_3607_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2116..3195
DNA (1080bp) protein (360aa)
GTPase Obg n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=OBG_RHOFD rbh
obgE; GTPase ObgE; K03979 GTP-binding protein Tax=CG_Rhodof_02
obgE; GTPase ObgE
cg2_3.0_scaffold_3607_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3214..4350
DNA (1137bp) protein (379aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=CG_Rhodof_02
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PROB_RHOFD rbh
cg2_3.0_scaffold_3607_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4379..4891)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YZ7_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_3607_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4884..5501)
DNA (618bp) protein (206aa)
dinucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] Tax=CG_Rhodof_02
RNA pyrophosphohydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RPPH_RHOFD rbh
dinucleoside polyphosphate hydrolase
cg2_3.0_scaffold_3607_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5593..7335
DNA (1743bp) protein (581aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Rhodof_02
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=SYP_RHOFD rbh
cg2_3.0_scaffold_3607_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7371..8000
DNA (630bp) protein (210aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D4N3_9BURK rbh
lytic transglycosylase catalytic subunit Tax=CG_Rhodof_02
lytic transglycosylase catalytic subunit
cg2_3.0_scaffold_3607_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8020..8346)
DNA (327bp) protein (109aa)
Glutaredoxin n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YZ3_RHOFD rbh
glutaredoxin-like protein; K07390 monothiol glutaredoxin Tax=CG_Rhodof_02
glutaredoxin-like protein
cg2_3.0_scaffold_3607_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8449..8667)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XRL6_ALCXX rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_3607_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8664..9536)
DNA (873bp) protein (291aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=CG_Rhodof_02
Release factor glutamine methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YZ0_RHOFD rbh
HemK family modification methylase
cg2_3.0_scaffold_3607_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9543..10637)
DNA (1095bp) protein (365aa)
Peptide chain release factor 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RF1_RHOFD rbh
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=CG_Rhodof_02
prfA; peptide chain release factor 1
cg2_3.0_scaffold_3607_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10747..12006)
DNA (1260bp) protein (420aa)
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=CG_Rhodof_02
Glutamyl-tRNA reductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=HEM1_RHOFD rbh
hemA; glutamyl-tRNA reductase
cg2_3.0_scaffold_3607_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12079..12357
DNA (279bp) protein (93aa)
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein id=12549985 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
cg2_3.0_scaffold_3607_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12338..13111)
DNA (774bp) protein (258aa)
glycerophosphodiester phosphodiesterase (EC:3.1.4.46); K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=CG_Rhodof_02
glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YY6_RHOFD rbh
cg2_3.0_scaffold_3607_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13115..14695)
DNA (1581bp) protein (527aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=CG_Rhodof_02
Lysine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XJ0_RHOFD rbh
lysS; lysyl-tRNA synthetase
Displaying 18 items

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