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cn_combo_scaffold_20

Alias: PEL42_1

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Displaying items 1-30 of 261 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_20_1
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

435..980
DNA (546bp) protein (182aa)
UPI0003CF838A related cluster n=1 Tax=unknown RepID=UPI0003CF838A
Resolvase {ECO:0000313|EMBL:ESY77460.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
resolvase domain-containing protein
cn_combo_scaffold_20_2
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1188..1862)
DNA (675bp) protein (225aa)
dimethylmenaquinone methyltransferase (EC:5.3.1.27) Tax=RBG_16_Armatimonadetes_67_12_curated
Protein dlpA n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQ15_9BACT
Dimethylmenaquinone methyltransferase
cn_combo_scaffold_20_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1897..2685)
DNA (789bp) protein (263aa)
Transcriptional regulator, IclR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9Z3_CONWI
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADB53088.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
cn_combo_scaffold_20_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2838..3710
DNA (873bp) protein (291aa)
Ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB n=30 Tax=Bordetella RepID=V8TYU8_BORPT
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWY36698.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanel
putative extracellular solute-binding protein
cn_combo_scaffold_20_5
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3834..4487
DNA (654bp) protein (218aa)
amino acid ABC transporter permease n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B347
polar amino acid ABC transporter inner membrane subunit
Amino acid ABC transporter membrane protein 1, PAAT family {ECO:0000313|EMBL:ABK03138.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter
cn_combo_scaffold_20_6
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4484..5140
DNA (657bp) protein (219aa)
Amino acid ABC transporter membrane protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MX08_SACVD
amino acid ABC transporter membrane protein
Amino acid ABC transporter membrane protein {ECO:0000313|EMBL:ACU97925.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharom
cn_combo_scaffold_20_7
RLO_PLX_64_10, Bacteria

Not on your lists

5137..5922
DNA (786bp) protein (262aa)
Arginine ABC transporter ATP-binding protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M453_9BACL
amino acid ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
amino acid ABC transporter ATP-binding protein
cn_combo_scaffold_20_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6341..6931
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036EA007
Uncharacterized protein {ECO:0000313|EMBL:EJC74367.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
cn_combo_scaffold_20_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6981..7325
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2T1_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77188.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
hypothetical protein
cn_combo_scaffold_20_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7325..8749
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KA69_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC74369.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
cn_combo_scaffold_20_11
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8852..9361
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JCS1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGL64349.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
cn_combo_scaffold_20_12
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9378..9851
DNA (474bp) protein (158aa)
UPI0003CE3C28 related cluster n=1 Tax=unknown RepID=UPI0003CE3C28
Uncharacterized protein {ECO:0000313|EMBL:ESX51850.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
superinfection immunity family protein
cn_combo_scaffold_20_13
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10273..11121)
DNA (849bp) protein (283aa)
UPI0003CEAE0A related cluster n=1 Tax=unknown RepID=UPI0003CEAE0A
Uncharacterized protein {ECO:0000313|EMBL:ESY57232.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_20_14
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11251..11871)
DNA (621bp) protein (207aa)
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
cn_combo_scaffold_20_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12151..13779)
DNA (1629bp) protein (543aa)
Choline dehydrogenase {ECO:0000313|EMBL:CDP53303.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CDP53303.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; D
FAD-dependent L-sorbose dehydrogenase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJL9_AGRRK
FAD-dependent L-sorbose dehydrogenase
cn_combo_scaffold_20_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13776..14465)
DNA (690bp) protein (230aa)
UPI0003CFD7F8 related cluster n=1 Tax=unknown RepID=UPI0003CFD7F8
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB85193.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia li
transcriptional regulator, TetR family rbh
cn_combo_scaffold_20_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14607..15515
DNA (909bp) protein (303aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1121477 species="Bacteria; Prot
UPI0003D01CC9 related cluster n=1 Tax=unknown RepID=UPI0003D01CC9
quinate/shikimate 5-dehydrogenase I delta
cn_combo_scaffold_20_18
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15518..17416)
DNA (1899bp) protein (633aa)
3-keto-5-aminohexanoate cleavage protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031A7E32
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EAS49675.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganes
4-hydroxyphenylpyruvate dioxygenase
cn_combo_scaffold_20_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17529..18434)
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3AXW7_9RHIZ
LysR family transcriptional regulator protein
LysR family transcriptional regulator protein {ECO:0000313|EMBL:AJC77363.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
cn_combo_scaffold_20_20
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18635..20119
DNA (1485bp) protein (495aa)
Response regulatory protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z0_PELHB
Fis family transcriptional regulator {ECO:0000313|EMBL:KKC34122.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psyc
response regulatory protein rbh
cn_combo_scaffold_20_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20132..21244)
DNA (1113bp) protein (371aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobac
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF142 RepID=J2L8G3_9RHIZ
sn-glycerol-3-phosphate ABC transporter ATP-binding protein
cn_combo_scaffold_20_22
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21253..22170)
DNA (918bp) protein (306aa)
Transmembrane component of ABC transporter protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQA8_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KKB76483.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC transporter permease
cn_combo_scaffold_20_23
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22181..23065)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EFD991
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KFL32752.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
glycerol-3-phosphate transporter permease
cn_combo_scaffold_20_24
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23133..24473)
DNA (1341bp) protein (447aa)
sn-glycerol 3-phosphate ABC transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B36B44
Glycerol 3-phosphate ABC transporter {ECO:0000313|EMBL:KKB76482.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli
ugpB-1; sn-glycerol 3-phosphate ABC transporter substrate-binding protein UgpB 1
cn_combo_scaffold_20_25
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24739..26445
DNA (1707bp) protein (569aa)
L,D-transpeptidase YcbB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z2_PELHB
L,D-transpeptidase YcbB {ECO:0000313|EMBL:KFC69743.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
L,D-transpeptidase YcbB
cn_combo_scaffold_20_26
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26592..28286
DNA (1695bp) protein (565aa)
Putative exported protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z3_PELHB
Putative exported protein {ECO:0000313|EMBL:KFC69744.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
cn_combo_scaffold_20_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28445..30376
DNA (1932bp) protein (644aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z4_PELHB
1-deoxy-d-xylulose-5-phosphate synthase
cn_combo_scaffold_20_28
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30373..31128)
DNA (756bp) protein (252aa)
Transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QAL3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KKC33314.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transcriptional regulator
cn_combo_scaffold_20_29
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31130..32107)
DNA (978bp) protein (326aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F6F9_9RHIZ
Putative sugar ABC transport system, permease protein YjfF {ECO:0000313|EMBL:KFC69713.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.
ribose ABC transporter permease
cn_combo_scaffold_20_30
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32104..33108)
DNA (1005bp) protein (335aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F6G0_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:KKC33316.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophi
ribose ABC transporter permease
Displaying items 1-30 of 261 in total

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