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cn_combo_scaffold_14

Alias: PEL42_2

Search features with annotation key words

Displaying items 1-30 of 317 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_14_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..562)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL29945.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cn_combo_scaffold_14_2
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

691..1242
DNA (552bp) protein (184aa)
UPI0003D01637 related cluster n=1 Tax=unknown RepID=UPI0003D01637
Uncharacterized protein {ECO:0000313|EMBL:ESZ38545.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
excalibur domain-containing protein
cn_combo_scaffold_14_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1487..4054)
DNA (2568bp) protein (856aa)
UvrABC system protein B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R666_PELHB
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
cn_combo_scaffold_14_4
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4218..4661)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UDW4_RHIRD
5'-nucleotidase {ECO:0000313|EMBL:KKC35643.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
cn_combo_scaffold_14_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5400)
DNA (660bp) protein (220aa)
SH3 type 3 domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP50165.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SH3 type 3 domain-containing protein
cn_combo_scaffold_14_6
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5665..6051)
DNA (387bp) protein (129aa)
Acyl-CoA hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R649_PELHB
Acyl-CoA hydrolase {ECO:0000313|EMBL:KKC35641.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;
acyl-CoA hydrolase
cn_combo_scaffold_14_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6054..6647)
DNA (594bp) protein (198aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=728005 species="Bacteria; Proteo
Thymidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R648_PELHB
thymidine kinase
cn_combo_scaffold_14_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6885..7277
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB86607.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
cn_combo_scaffold_14_9
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7274..8179)
DNA (906bp) protein (302aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R646_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB78615.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
permease of the drug/metabolite transporter (DMT) superfamily
cn_combo_scaffold_14_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8457..9086)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB89_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10141.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_14_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9301..9729)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IMW1_AZOC5
Uncharacterized protein {ECO:0000313|EMBL:KKB86605.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
cn_combo_scaffold_14_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9849..10136)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31906.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cn_combo_scaffold_14_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10437..11639
DNA (1203bp) protein (401aa)
Aspartate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R644_PELHB
Aspartate aminotransferase {ECO:0000313|EMBL:KFC66980.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
aspartate aminotransferase
cn_combo_scaffold_14_14
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11907..13019)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AIY4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFC66981.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
cn_combo_scaffold_14_15
unknown

Not on your lists

comp(13265..13936)
DNA (672bp) protein (224aa)

This feature has no annotations

cn_combo_scaffold_14_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14202..15095)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU7_PELHB
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB10134.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
LysR family transcriptional regulator
cn_combo_scaffold_14_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15205..16155)
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Thioredoxin reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU6_PELHB
thioredoxin reductase rbh
cn_combo_scaffold_14_18
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16298..16771)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU5_PELHB
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1293439 species="Bacteri
transcription elongation factor GreA
cn_combo_scaffold_14_19
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17153..18724
DNA (1572bp) protein (524aa)
Sel1 repeat protein n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0F1U1_9NEIS
Sel1 repeat protein {ECO:0000313|EMBL:EGC16482.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 3339
Sel1 domain-containing protein
cn_combo_scaffold_14_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18776..20941)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9X7_PELHB
Transport protein {ECO:0000313|EMBL:CDP53141.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
cn_combo_scaffold_14_21
unknown

Not on your lists

21071..22009
DNA (939bp) protein (313aa)

This feature has no annotations

cn_combo_scaffold_14_22
unknown

Not on your lists

22006..23274
DNA (1269bp) protein (423aa)

This feature has no annotations

cn_combo_scaffold_14_23
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23457..24287)
DNA (831bp) protein (277aa)
AraC family transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SI00_9RHIZ
AraC family transcriptional regulator {ECO:0000313|EMBL:ETR78080.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
AraC family transcriptional regulator
cn_combo_scaffold_14_24
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24433..26088
DNA (1656bp) protein (552aa)
ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG15_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL29024.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
ABC transporter ATP-binding protein
cn_combo_scaffold_14_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26321..26659
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB10018.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_14_26
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26685..27518
DNA (834bp) protein (278aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG13_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35616.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
alpha/beta hydrolase
cn_combo_scaffold_14_27
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27849..28298)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDS8_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:KKC35687.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
cn_combo_scaffold_14_28
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28483..29421
DNA (939bp) protein (313aa)
Protein rarD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG12_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34722.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
protein rarD rbh
cn_combo_scaffold_14_29
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29521..30420)
DNA (900bp) protein (300aa)
Hydrogen peroxide-inducible genes activator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG11_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34702.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hydrogen peroxide-inducible genes activator
cn_combo_scaffold_14_30
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30515..32734
DNA (2220bp) protein (740aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
katG; catalase-peroxidase KatG (EC:1.11.1.21)
catalase/hydroperoxidase HPI(I) n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EDE7E
Displaying items 1-30 of 317 in total

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