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cn_combo_scaffold_49

Alias: PEL42_3

Search features with annotation key words

Displaying items 1-30 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_49_1
unknown

Not on your lists

comp(163..861)
DNA (699bp) protein (233aa)

This feature has no annotations

cn_combo_scaffold_49_2
actinobacterium SCGC AAA027-M14, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(858..1916)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA027-M14 RepID=UPI00037544CD
cn_combo_scaffold_49_3
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1910..3016)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DWB0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAB58338.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensi
hypothetical protein
cn_combo_scaffold_49_4
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3119..4102)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SPV4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGK13936.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein
cn_combo_scaffold_49_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4505..4777)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI000377BD30
Uncharacterized protein {ECO:0000313|EMBL:EPR23512.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
cn_combo_scaffold_49_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4791..6326
DNA (1536bp) protein (512aa)
Transposase of ISsp1 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJA0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP73227.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pau
cn_combo_scaffold_49_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6260..6607)
DNA (348bp) protein (116aa)
Probable insertion sequence transposase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KQS2_RHISN
Transposase {ECO:0000313|EMBL:KKC31367.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transposase
cn_combo_scaffold_49_8
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7689..8627)
DNA (939bp) protein (313aa)
Phage integrase family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LC27_9RHIZ
Phage integrase family protein {ECO:0000313|EMBL:EIZ82159.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methyl
hypothetical protein
cn_combo_scaffold_49_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8845..10806)
DNA (1962bp) protein (654aa)
Integrase family protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QFZ4_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:KKC32963.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
integrase family protein rbh
cn_combo_scaffold_49_trna_3
unknown

Not on your lists

comp(10933..11004)
DNA (72bp)
transferRNA
cn_combo_scaffold_49_trna_1
unknown

Not on your lists

11177..11250
DNA (74bp)
transferRNA
cn_combo_scaffold_49_10
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11429..11815
DNA (387bp) protein (129aa)
Zinc-finger protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBC7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC31333.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
zinc-finger protein
cn_combo_scaffold_49_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11829..12104)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL27245.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
cn_combo_scaffold_49_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12237..12851)
DNA (615bp) protein (205aa)
Substrate-specific component BioY of biotin ECF transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBY1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08857.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
substrate-specific component BioY of biotin ECF transporter
cn_combo_scaffold_49_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12945..13880
DNA (936bp) protein (312aa)
Metallo-beta-lactamase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBY0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31095.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
metallo-beta-lactamase family protein
cn_combo_scaffold_49_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13912..15027)
DNA (1116bp) protein (372aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBW4_PELHB
chorismate synthase
cn_combo_scaffold_49_15
unknown

Not on your lists

comp(15229..15486)
DNA (258bp) protein (86aa)

This feature has no annotations

cn_combo_scaffold_49_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15548..16168)
DNA (621bp) protein (207aa)
Phosphoglycerate mutase family (Rhiz) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBW2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10196.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phosphoglycerate mutase family (Rhiz)
cn_combo_scaffold_49_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16286..17701
DNA (1416bp) protein (472aa)
D-2-hydroxyglutarate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBW0_PELHB
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKB08855.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.
D-2-hydroxyacid dehydrogenase
cn_combo_scaffold_49_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17762..18325
DNA (564bp) protein (188aa)
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08854.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase-like protein
cn_combo_scaffold_49_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18414..19142)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08853.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_49_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19209..19610
DNA (402bp) protein (134aa)
MutT/nudix family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08852.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
MutT/nudix family protein
cn_combo_scaffold_49_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19620..20051
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08851.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_49_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20138..20416
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08850.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_49_23
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20476..21021
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E5DCA
Uncharacterized protein {ECO:0000313|EMBL:KFB10575.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
cn_combo_scaffold_49_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21097..22425)
DNA (1329bp) protein (443aa)
Dihydroorotase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBT9_PELHB
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dihydroorotase
cn_combo_scaffold_49_25
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22502..23323
DNA (822bp) protein (274aa)
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBT8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29128.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress
cn_combo_scaffold_49_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23437..24021
DNA (585bp) protein (195aa)
Putative hydrolases of HD superfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBT7_PELHB
Hydrolase {ECO:0000313|EMBL:KKB08846.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative hydrolases of HD superfamily
cn_combo_scaffold_49_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24133..24582
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBT6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08845.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_49_28
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24579..25556)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBT5_PELHB
Cell wall hydrolase SleB {ECO:0000313|EMBL:KFC69564.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein rbh
Displaying items 1-30 of 225 in total

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