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cn_combo_scaffold_69

Alias: PEL42_6

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Displaying items 1-30 of 254 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_69_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..244
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000381E98B
Transposase {ECO:0000313|EMBL:KKB77398.1}; Flags: Fragment;; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
transposase IS4 family protein
cn_combo_scaffold_69_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1243..1632
DNA (390bp) protein (130aa)
Translation elongation factor-like GTPase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W2N6_RHILT
Translation elongation factor-like GTPase {ECO:0000313|EMBL:EJC79996.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
elongation factor G
cn_combo_scaffold_69_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1819..2619)
DNA (801bp) protein (267aa)
ABC transporter related protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG3_PELHB
ABC transporter {ECO:0000313|EMBL:KKB77714.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC transporter
cn_combo_scaffold_69_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2612..3652)
DNA (1041bp) protein (347aa)
Transport system permease protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M35_MESSB
Iron ABC transporter permease {ECO:0000313|EMBL:KFL32052.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
transport system permease
cn_combo_scaffold_69_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3649..4668)
DNA (1020bp) protein (340aa)
Transport system permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG5_PELHB
ABC transporter permease {ECO:0000313|EMBL:KFL32051.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transport system permease
cn_combo_scaffold_69_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4767..5681
DNA (915bp) protein (305aa)
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG6_PELHB
Iron siderophore-binding protein {ECO:0000313|EMBL:KKB77711.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component
cn_combo_scaffold_69_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5732..6652
DNA (921bp) protein (307aa)
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG6_PELHB
Iron siderophore-binding protein {ECO:0000313|EMBL:KFL32049.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavi
iron-siderophore ABC transporter substrate-binding protein
cn_combo_scaffold_69_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6669..7475
DNA (807bp) protein (269aa)
Iron3+ dicitrate transport ATP-binding protein FecE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B9_PELHB
ABC transporter {ECO:0000313|EMBL:KFL30494.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron3+ dicitrate transport ATP-binding protein FecE
cn_combo_scaffold_69_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7472..8494
DNA (1023bp) protein (341aa)
Iron3+ dicitrate transport system permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B8_PELHB
Iron ABC transporter permease {ECO:0000313|EMBL:KFL30495.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
iron3+ dicitrate transport system permease protein rbh
cn_combo_scaffold_69_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8494..9561
DNA (1068bp) protein (356aa)
Iron3+ dicitrate transport system permease protein FecD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B7_PELHB
Ferrichrome ABC transporter permease {ECO:0000313|EMBL:KFL30496.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribof
iron3+ dicitrate transport system permease protein FecD rbh
cn_combo_scaffold_69_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9577..10542
DNA (966bp) protein (322aa)
Cobalamin/Fe3+-siderophores transport systems, secreted component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30497.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cobalamin/Fe3+-siderophores transport systems, secreted component rbh
cn_combo_scaffold_69_12
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10599..11579
DNA (981bp) protein (327aa)
Putative iron compound-binding protein of ABC transporter family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B3_PELHB
putative iron compound-binding protein of ABC transporter family
Putative iron compound-binding protein of ABC transporter family {ECO:0000313|EMBL:AEQ52357.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pe
cn_combo_scaffold_69_13
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11579..12490
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B2_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ52356.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
cn_combo_scaffold_69_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12509..13471
DNA (963bp) protein (321aa)
Putative iron compound-binding protein of ABC transporter family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B0_PELHB
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KFL30499.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
putative iron compound-binding protein of ABC transporter family
cn_combo_scaffold_69_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13660..14451)
DNA (792bp) protein (264aa)
Fructose ABC transporter, ATP-binding component FrcA n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QN91_9RHOB
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB08147.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
ABC transporter ATP-binding protein
cn_combo_scaffold_69_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14451..15509)
DNA (1059bp) protein (353aa)
Inner-membrane translocator n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJ76_9RHOB
ABC transporter permease {ECO:0000313|EMBL:KKB08146.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sugar transport system, permease
cn_combo_scaffold_69_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15587..16600)
DNA (1014bp) protein (338aa)
Fructose ABC transporter, substrate-binding component FrcB n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RSX8_9RHOB
Sugar ABC transporter {ECO:0000313|EMBL:KKB08145.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sugar transport system, periplasmic protein
cn_combo_scaffold_69_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16776..17978
DNA (1203bp) protein (401aa)
Transcriptional regulator FrcR for fructose utilization, ROK family n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9S4S7_9RHOB
ROK family transcriptional regulator {ECO:0000313|EMBL:KKB08391.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chin
putative transcriptional repressor
cn_combo_scaffold_69_19
unknown

Not on your lists

comp(18338..19105)
DNA (768bp) protein (256aa)

This feature has no annotations

cn_combo_scaffold_69_20
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19102..20133)
DNA (1032bp) protein (344aa)
Oxidoreductase domain protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JSF8_ARTS2
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABK01978.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp.
cn_combo_scaffold_69_21
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20130..21014)
DNA (885bp) protein (295aa)
Collagen alpha-1(X) chain n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WTH5_9ACTO
Collagen alpha-1(X) chain {ECO:0000313|EMBL:EFL28369.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 5
xylose isomerase domain-containing protein
cn_combo_scaffold_69_22
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21109..22176)
DNA (1068bp) protein (356aa)
ATPase component of ABC-type sugar transporter n=2 Tax=Microvirga sp. WSM3557 RepID=I4YSJ7_9RHIZ
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM26939.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" sourc
ABC transporter ATP-binding protein
cn_combo_scaffold_69_23
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(22181..23008)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036264BB
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ43589.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (
cn_combo_scaffold_69_24
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(23013..23927)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003647607
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ43590.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
cn_combo_scaffold_69_25
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(23927..25189)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036906BD
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACZ43591.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / Y
cn_combo_scaffold_69_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25487..26524
DNA (1038bp) protein (346aa)
catabolite control protein A (Glucose-resistance amylase regulator) (EC:5.1.1.1)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000361DF13
Uncharacterized protein {ECO:0000313|EMBL:KKB10211.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_69_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26709..27713
DNA (1005bp) protein (335aa)
UPI0003CE1C16 related cluster n=1 Tax=unknown RepID=UPI0003CE1C16
Esterase {ECO:0000313|EMBL:KKB08651.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
beta-lactamase
cn_combo_scaffold_69_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27714..28829
DNA (1116bp) protein (372aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BR15_9RHIZ
AnhMurNAc kinase
cn_combo_scaffold_69_29
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29215..30126)
DNA (912bp) protein (304aa)
ABC transporter related protein n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3EY82_KETVY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KFL29616.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina
ABC transporter rbh
cn_combo_scaffold_69_30
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30123..30941)
DNA (819bp) protein (273aa)
Putative ATP-binding component of ABC transporter n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3EY81_KETVY
Peptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDP54110.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
ABC transporter ATP-binding protein
Displaying items 1-30 of 254 in total

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