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cn_combo_scaffold_170

Alias: PEL42_14

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_170_1
unknown

Not on your lists

3..116
DNA (114bp) protein (38aa)

This feature has no annotations

cn_combo_scaffold_170_2
unknown

Not on your lists

163..540
DNA (378bp) protein (126aa)

This feature has no annotations

cn_combo_scaffold_170_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(570..1073)
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC31657.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
cn_combo_scaffold_170_4
unknown

Not on your lists

1215..1673
DNA (459bp) protein (153aa)

This feature has no annotations

cn_combo_scaffold_170_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1908..2636)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LD01_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGM52826.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
GntR family transcriptional regulator
cn_combo_scaffold_170_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3038..4918
DNA (1881bp) protein (627aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM52827.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
cn_combo_scaffold_170_7
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4908..6527
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037A9544
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEI45642.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Sacc
peptide ABC transporter substrate-binding protein
cn_combo_scaffold_170_8
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6620..7546
DNA (927bp) protein (309aa)
Dipeptide ABC superfamily ATP binding cassette transporter, permease protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CWB7_9ACTO
ABC transporter permease
Dipeptide ABC superfamily ATP binding cassette transporter, permease protein {ECO:0000313|EMBL:EGY78241.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; P
cn_combo_scaffold_170_9
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7539..8447
DNA (909bp) protein (303aa)
Putative peptide ABC transporter permease protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UV48_9MICO
Putative peptide ABC transporter permease protein {ECO:0000313|EMBL:GAB49606.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus
ABC transporter permease
cn_combo_scaffold_170_10
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8454..9458
DNA (1005bp) protein (335aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Streptomyces sp. AA1529 RepID=UPI00031A29B0
Oligopeptide ABC transporter {ECO:0000313|EMBL:EGG45027.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus
peptide transport system ATP-binding protein
cn_combo_scaffold_170_11
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9451..10473
DNA (1023bp) protein (341aa)
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein id=12557246 bin=CNBR_ACIDO species=Salinispora pacifica genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDX26366.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
cn_combo_scaffold_170_12
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..11842
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K3Z8_CUPNH
Uncharacterized protein {ECO:0000313|EMBL:KEQ02811.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
cn_combo_scaffold_170_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11858..12979
DNA (1122bp) protein (374aa)
Carboxypeptidase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJ48_BRAJP
Carboxypeptidase G2 {ECO:0000313|EMBL:AHY55519.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonic
carboxypeptidase
cn_combo_scaffold_170_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12994..13476)
DNA (483bp) protein (161aa)
Transcription elongation factor n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89E63_BRADU
Transcription elongation factor {ECO:0000313|EMBL:KKB09662.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhaten
putative transcription elongation factor
cn_combo_scaffold_170_15
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13632..14840
DNA (1209bp) protein (403aa)
Oxalate/formate antiporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC2_PELHB
Membrane protein {ECO:0000313|EMBL:KKB77448.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Oxalate/formate antiporter
cn_combo_scaffold_170_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14844..16187)
DNA (1344bp) protein (448aa)
Multidrug resistance protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCV7_PELHB
Multidrug transporter {ECO:0000313|EMBL:KKB11718.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
multidrug resistance protein
cn_combo_scaffold_170_17
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16313..16894
DNA (582bp) protein (194aa)
5'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:KKC34858.1}; EC=3.2.2.9 {ECO:0000313|EMBL:KKC34858.1};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomic
pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteinenucleosidase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L502_AGRSH
cn_combo_scaffold_170_18
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16891..17220)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKS2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KKB79122.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
cn_combo_scaffold_170_19
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17378..17710
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC72313.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
cn_combo_scaffold_170_20
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17847..18311
DNA (465bp) protein (155aa)
Spore-cortex-lytic enzyme prepeptide n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDH8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34861.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
spore-cortex-lytic enzyme prepeptide
cn_combo_scaffold_170_21
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18318..18590)
DNA (273bp) protein (91aa)
FlhB-related protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLW4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB79126.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
flagellar protein FhlB
cn_combo_scaffold_170_22
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18587..20176)
DNA (1590bp) protein (530aa)
Putative uncharacterized protein n=1 Tax=Roseibium sp. TrichSKD4 PF6_9RHOB">RepID=E2CPF6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKC34864.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
cn_combo_scaffold_170_23
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20279..21022)
DNA (744bp) protein (248aa)
Glycosyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFV5_PELHB
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKC38894.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidi
glycosyltransferase
cn_combo_scaffold_170_24
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21125..23836)
DNA (2712bp) protein (904aa)
Sensor histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR7_PELHB
Sodium:solute symporter {ECO:0000313|EMBL:KKC34867.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
sensor histidine kinase
cn_combo_scaffold_170_25
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23836..24042)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC34868.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
cn_combo_scaffold_170_26
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24056..24439)
DNA (384bp) protein (128aa)
DNA-binding response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR5_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKC34869.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
DNA-binding response regulator
cn_combo_scaffold_170_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24498..26120)
DNA (1623bp) protein (541aa)
Transcriptional regulator, XRE family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB83739.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
XRE family transcriptional regulator
cn_combo_scaffold_170_28
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26313..27662
DNA (1350bp) protein (450aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EF22F4
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZQ15303.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
branched-chain amino acid ABC transporter substrate-binding protein
cn_combo_scaffold_170_29
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27765..28793
DNA (1029bp) protein (343aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031197AF
ABC transporter permease {ECO:0000313|EMBL:EZQ15302.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauza
putative ABC transporter subunit
cn_combo_scaffold_170_30
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28800..29951
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000307AE88
ABC transporter permease {ECO:0000313|EMBL:EXL09001.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defl
branched-chain amino acid transport system permease protein LivM
Displaying items 1-30 of 133 in total

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