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cn_combo_scaffold_224

Alias: PEL42_16

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_224_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220..459)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB76495.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
cn_combo_scaffold_224_2
unknown

Not on your lists

comp(464..586)
DNA (123bp) protein (41aa)

This feature has no annotations

cn_combo_scaffold_224_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1096..1773)
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAS4_PELHB
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:AEQ52597.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacteriu
cn_combo_scaffold_224_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1824..3143)
DNA (1320bp) protein (440aa)
Putative NreB protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAS3_PELHB
putative NreB protein rbh
Putative NreB protein {ECO:0000313|EMBL:AEQ52596.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium ha
cn_combo_scaffold_224_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3153..3437)
DNA (285bp) protein (95aa)
Putative NreA protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAS2_PELHB
putative NreA protein
Putative NreA protein {ECO:0000313|EMBL:AEQ52595.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium ha
cn_combo_scaffold_224_6
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3480..4253)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAS1_PELHB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEQ52594.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
cn_combo_scaffold_224_7
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4264..5001)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAS0_PELHB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEQ52593.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
cn_combo_scaffold_224_8
unknown

Not on your lists

5220..5339
DNA (120bp) protein (40aa)

This feature has no annotations

cn_combo_scaffold_224_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5666..6037)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB76492.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
cn_combo_scaffold_224_10
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6430..6876)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZH9_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KKC40880.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
cn_combo_scaffold_224_11
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6946..8694)
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A50741
recombinase
Recombinase {ECO:0000313|EMBL:ABB39570.2}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskens
cn_combo_scaffold_224_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8867..9529)
DNA (663bp) protein (221aa)
Mg(2+) chelatase family protein / ComM-related protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8G1_PELHB
ATPase AAA {ECO:0000313|EMBL:KKB07857.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Mg(2+) chelatase family protein / ComM-related protein
cn_combo_scaffold_224_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9713..10552
DNA (840bp) protein (280aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;"
Phage lysin, glycosyl hydrolase, family 25 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F9_PELHB
phage lysin, glycosyl hydrolase, family 25 rbh
cn_combo_scaffold_224_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..11632
DNA (990bp) protein (330aa)
Putative stomatin/prohibitin-family membrane protease subunit YbbK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA3_PELHB
Membrane protein {ECO:0000313|EMBL:KKB08324.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative stomatin/prohibitin-family membrane protease subunit YbbK
cn_combo_scaffold_224_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11646..12095
DNA (450bp) protein (150aa)
Putative activity regulator of membrane protease YbbK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29145.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative activity regulator of membrane protease YbbK
cn_combo_scaffold_224_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12207..13478
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QCT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07854.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_224_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13598..14482)
DNA (885bp) protein (295aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=429727 s
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA0_PELHB
UTP-glucose-1-phosphate uridylyltransferase
cn_combo_scaffold_224_18
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14584..15570
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC99_PELHB
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KKB76935.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
UDP-glucose 4-epimerase
cn_combo_scaffold_224_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15581..16777
DNA (1197bp) protein (399aa)
Membrane-bound lytic murein transglycosylase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC98_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08323.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
membrane-bound lytic murein transglycosylase B
cn_combo_scaffold_224_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16764..18002
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC97_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07851.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_224_21
unknown

Not on your lists

comp(17996..18118)
DNA (123bp) protein (41aa)

This feature has no annotations

cn_combo_scaffold_224_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18224..18856)
DNA (633bp) protein (211aa)
Membrane protein, MarC family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F8_PELHB
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
membrane protein, MarC family
cn_combo_scaffold_224_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18921..19865)
DNA (945bp) protein (315aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
Glutathione synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F7_PELHB
glutathione synthetase
cn_combo_scaffold_224_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19874..20260)
DNA (387bp) protein (129aa)
UPF0102 protein KKY_3372 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F6_PELHB
UPF0102 protein VE26_14500 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatens
hypothetical protein
cn_combo_scaffold_224_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20229..21116)
DNA (888bp) protein (296aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F5_PELHB
rRNA small subunit methyltransferase I
cn_combo_scaffold_224_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21198..22418
DNA (1221bp) protein (407aa)
Extracellular ligand-binding receptor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07848.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter substrate-binding protein
cn_combo_scaffold_224_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22452..23606)
DNA (1155bp) protein (385aa)
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F3_PELHB
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KKB07847.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatens
radical SAM family protein
cn_combo_scaffold_224_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23760..24404)
DNA (645bp) protein (215aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7U5_PELHB
nucleoside 5-triphosphatase RdgB
cn_combo_scaffold_224_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24604..25020)
DNA (417bp) protein (139aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rul
Ribonuclease PH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7U4_PELHB
ribonuclease PH
cn_combo_scaffold_224_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25475..26557
DNA (1083bp) protein (361aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7U3_PELHB
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomic
heat-inducible transcription repressor HrcA
Displaying items 1-30 of 161 in total

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