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cn_combo_scaffold_283

Alias: PEL42_18

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Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_283_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202..1560)
DNA (1359bp) protein (453aa)
Putative extracellular solute-binding protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB08953.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
CUT1 family carbohydrate ABC transporter substrate-binding protein
cn_combo_scaffold_283_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1798..2823
DNA (1026bp) protein (342aa)
LacI family transcriptional regulator n=1 Tax=Thalassospira lucentensis RepID=UPI0003B4B250
Uncharacterized protein {ECO:0000313|EMBL:KKC31787.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
LacI family transcriptional regulator
cn_combo_scaffold_283_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2903..3970)
DNA (1068bp) protein (356aa)
ABC transporter nucleotide binding/ATPase (Sugar) n=1 Tax=Nitratireductor indicus C115 RepID=K2PSV1_9RHIZ
ABC transporter nucleotide binding/ATPase (Sugar) {ECO:0000313|EMBL:EKF44162.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.
putative amino acid ABC transporter, ATP-binding protein
cn_combo_scaffold_283_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3995..5365)
DNA (1371bp) protein (457aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N9H8_9RHIZ
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein {ECO:0000313|EMBL:EKF44163.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyl
Putative FAD dependent oxidoreductase rbh
cn_combo_scaffold_283_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..6827
DNA (1338bp) protein (446aa)
Extracellular solute-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P240_9RHIZ
Extracellular solute-binding protein {ECO:0000313|EMBL:EKF44164.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Ni
sugar ABC transporter substrate-binding protein
cn_combo_scaffold_283_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6896..7804
DNA (909bp) protein (303aa)
Sugar ABC transporter permease n=1 Tax=Nitratireductor indicus C115 RepID=K2NY75_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:EKF44165.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratir
ABC transporter permease
cn_combo_scaffold_283_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7808..8641
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitratireductor indicus C115 RepID=K2PAK9_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKF44166.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
ABC transporter
cn_combo_scaffold_283_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8857..9822
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P236_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44159.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
ABC transporter substrate-binding protein rbh
cn_combo_scaffold_283_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9819..10331
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31224.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cn_combo_scaffold_283_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10344..11849
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PSU6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44157.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
cn_combo_scaffold_283_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12005..12907)
DNA (903bp) protein (301aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Nitratireductor indicus C115 RepID=K2PAK6_9RHIZ
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EKF44161.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;"
Dihydrodipicolinate synthase
cn_combo_scaffold_283_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13210..14004
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NY71_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44160.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
transcriptional regulator rbh
cn_combo_scaffold_283_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14050..14658)
DNA (609bp) protein (203aa)
PTS-dependent dihydroxyacetone kinase,ADP-binding subunit DhaL (Glycerone kinase) (DHA kinase) {ECO:0000313|EMBL:CCD01581.1}; EC=2.7.1.29 {ECO:0000313|EMBL:CCD01581.1};; TaxID=1064539 species="Bacteri
PTS-dependent dihydroxyacetone kinase,ADP-binding subunit DhaL (Glycerone kinase) (DHA kinase) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUH2_AZOBR
dhaL; PTS-dependent dihydroxyacetone kinase,ADP-binding subunit DhaL (Glycerone kinase) (DHA kinase)
cn_combo_scaffold_283_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14655..15653)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037C7FC2
Dihydroxyacetone kinase {ECO:0000313|EMBL:KKB09879.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dihydroxyacetone kinase
cn_combo_scaffold_283_15
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15800..16270)
DNA (471bp) protein (157aa)
Activator of Hsp90 ATPase-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCN1_PELHB
activator of Hsp90 ATPase-like protein
Activator of Hsp90 ATPase-like protein {ECO:0000313|EMBL:AEQ50703.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="P
cn_combo_scaffold_283_16
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16270..16608)
DNA (339bp) protein (113aa)
Transcriptional regulator, ArsR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCN2_PELHB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEQ50704.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="P
cn_combo_scaffold_283_17
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16605..17291)
DNA (687bp) protein (229aa)
Putative glutathione S-transferase-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCN3_PELHB
putative glutathione S-transferase-like protein rbh
Putative glutathione S-transferase-like protein {ECO:0000313|EMBL:AEQ50705.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;"
cn_combo_scaffold_283_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17595..17960
DNA (366bp) protein (122aa)
YCII-related protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GYU0_STRC2
Uncharacterized protein {ECO:0000313|EMBL:KKB10313.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DGPFAETKE domain-containing protein
cn_combo_scaffold_283_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18182..19375
DNA (1194bp) protein (398aa)
class V aminotransferase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627F74
Uncharacterized protein {ECO:0000313|EMBL:KKB08947.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_283_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19540..20928
DNA (1389bp) protein (463aa)
glycerol-3-phosphate ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037E9673
Glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31322.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
Glycerol-3-phosphate transporter periplasmic binding protein rbh
cn_combo_scaffold_283_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21098..21982
DNA (885bp) protein (295aa)
SN-glycerol-3-phosphate transport system permease protein UgpA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA31_PELHB
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KFL31321.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
SN-glycerol-3-phosphate transport system permease protein UgpA
cn_combo_scaffold_283_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21995..22843
DNA (849bp) protein (283aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF122 RepID=J3BI00_9RHIZ
Glycerol-3-phosphate transporter membrane protein {ECO:0000313|EMBL:KKB08944.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
ugpE-3; sn-glycerol-3-phosphate ABC transporter permease protein UgpE 3
cn_combo_scaffold_283_23
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22847..23890
DNA (1044bp) protein (348aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobac
sn-glycerol-3-phosphate import ATP-binding protein UgpC 3 n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=UGPC3_RHIEC
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
cn_combo_scaffold_283_24
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23913..24659
DNA (747bp) protein (249aa)
glycerophosphoryl diester phosphodiesterase protein (EC:3.1.4.46) rbh
glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium phaseoli RepID=UPI00037C3017
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KFL31318.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ri
cn_combo_scaffold_283_25
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24678..25451
DNA (774bp) protein (258aa)
Putative deoR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M587_RHIL3
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KFL31317.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribo
DeoR family transcriptional regulator rbh
cn_combo_scaffold_283_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25528..26100
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO38858.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein id=12554741 bin=CNBR_ACIDO species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
cn_combo_scaffold_283_27
unknown

Not on your lists

26216..26707
DNA (492bp) protein (164aa)

This feature has no annotations

cn_combo_scaffold_283_28
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26741..28567)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAQ1_PELHB
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) rbh
cn_combo_scaffold_283_29
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28701..30413
DNA (1713bp) protein (571aa)
Type I secretion system ATPase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAQ0_PELHB
type I secretion system ATPase rbh
Type I secretion system ATPase {ECO:0000313|EMBL:AEQ52573.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibac
cn_combo_scaffold_283_30
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30410..31726
DNA (1317bp) protein (439aa)
HlyD family secretion protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAP9_PELHB
HlyD family secretion protein rbh
HlyD family secretion protein {ECO:0000313|EMBL:AEQ52572.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibact
Displaying items 1-30 of 87 in total

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