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cn_combo_scaffold_289

Alias: PEL42_20

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Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_289_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..178
DNA (177bp) protein (59aa)
Ureidoglycolate lyase n=1 Tax=Halomonas sp. HAL1 RepID=G4F4Q8_9GAMM
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KKB07539.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
2,4-diketo-3-deoxy-L-fuconate hydrolase
cn_combo_scaffold_289_2
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229..543)
DNA (315bp) protein (105aa)
rhaM; L-rhamnose mutarotase RhaM (EC:5.1.3.-)
L-rhamnose mutarotase RhaM {ECO:0000313|EMBL:AII87864.1}; EC=5.1.3.- {ECO:0000313|EMBL:AII87864.1};; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628F21
cn_combo_scaffold_289_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(557..1369)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036576B6
Xylose isomerase {ECO:0000313|EMBL:KKB11110.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative Xylose isomerase
cn_combo_scaffold_289_4

Not on your lists

comp(1366..2418)
DNA (1053bp) protein (351aa)
Putative oxidoreductase n=1 Tax=uncultured bacterium 1042 RepID=B8R8U7_9BACT
Putative oxidoreductase {ECO:0000313|EMBL:ACF98103.1}; TaxID=548897 species="Bacteria; environmental samples.;" source="uncultured bacterium 1042.;"
putative oxidoreductase
cn_combo_scaffold_289_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2438..3934)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003601C41
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB11047.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geoje
ABC transporter ATP-binding protein
cn_combo_scaffold_289_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3987..5159)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00038202FB
ABC transporter {ECO:0000313|EMBL:KKB11048.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
component of ABC transporter
cn_combo_scaffold_289_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5299..6294
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370A3C1
ABC transporter permease {ECO:0000313|EMBL:KKB11046.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
inner-membrane translocator
cn_combo_scaffold_289_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..7188)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6BAA0_RHILS
AraC family transcriptional regulator {ECO:0000313|EMBL:KKB80402.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sol
hypothetical protein rbh
cn_combo_scaffold_289_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7347..8798
DNA (1452bp) protein (484aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00235488}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00235488};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Putative L-arabinose isomerase protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MP9_JANSC
putative L-arabinose isomerase protein rbh
cn_combo_scaffold_289_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8829..9857
DNA (1029bp) protein (343aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI0002F2658F
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB80400.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="D
ABC transporter,periplasmic solute-binding protein
cn_combo_scaffold_289_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9857..11359
DNA (1503bp) protein (501aa)
Monosaccharide-transporting ATPase n=5 Tax=Rhizobium meliloti RepID=F6C2R0_SINMB
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB80399.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
sugar ABC transporter ATP-binding protein rbh
cn_combo_scaffold_289_12
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11352..12332
DNA (981bp) protein (327aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6C2Q9_SINMB
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB80398.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sugar ABC transporter permease rbh
cn_combo_scaffold_289_13
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12345..14018
DNA (1674bp) protein (558aa)
esterase n=1 Tax=Rhizobium meliloti RepID=UPI0003726FD2
esterase rbh
Esterase {ECO:0000313|EMBL:AJY45893.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
cn_combo_scaffold_289_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14375..15331
DNA (957bp) protein (319aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrob
tRNA-dihydrouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ4_PELHB
tRNA dihydrouridine synthase A
cn_combo_scaffold_289_15
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15459..17162
DNA (1704bp) protein (568aa)
alpha/beta hydrolase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003479AB1
Uncharacterized protein {ECO:0000313|EMBL:KKB82975.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
cn_combo_scaffold_289_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(17224..18024)
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWM9_9CHLR
alpha/beta family hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFH84612.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonoba
cn_combo_scaffold_289_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18024..18710)
DNA (687bp) protein (229aa)
Transpoter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09068.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
transporter
cn_combo_scaffold_289_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18779..19612)
DNA (834bp) protein (278aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER0_PELHB
cobalamin-5-phosphate synthase CobS
cn_combo_scaffold_289_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19677..20699
DNA (1023bp) protein (341aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ5_PELHB
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
cn_combo_scaffold_289_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20818..22344)
DNA (1527bp) protein (509aa)
Signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF43_PELHB
ATPase {ECO:0000313|EMBL:KKB09071.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
signal transduction histidine kinase
cn_combo_scaffold_289_21
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22613..23098
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF44_PELHB
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KFC71225.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
transcriptional regulator, AsnC family
cn_combo_scaffold_289_22
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23178..24191)
DNA (1014bp) protein (338aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
Cyclic pyranopterin monophosphate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF45_PELHB
molybdenum cofactor biosynthesis protein MoaA
cn_combo_scaffold_289_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24305..24892)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003753BCC
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KKB09074.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinha
ErfK/YbiS/YcfS/YnhG family protein
cn_combo_scaffold_289_24
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25148..25849
DNA (702bp) protein (234aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF46_PELHB
ribose 5-phosphate isomerase A
cn_combo_scaffold_289_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25867..26394
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF47_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09075.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_289_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26501..27874
DNA (1374bp) protein (458aa)
Glutathione reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF48_PELHB
Glutathione reductase {ECO:0000313|EMBL:KKB09076.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glutathione reductase
cn_combo_scaffold_289_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27959..29335
DNA (1377bp) protein (459aa)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF49_PELHB
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KKB09077.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II
cn_combo_scaffold_289_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29445..31358
DNA (1914bp) protein (638aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:ABE62041.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE62041.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP06_NITHX
signal transduction histidine kinase
cn_combo_scaffold_289_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31362..31781)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QN88_BRESC
Uncharacterized protein {ECO:0000313|EMBL:KKB09078.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
response regulator receiver and unknown domain-containing protein
cn_combo_scaffold_289_30
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31998..33665
DNA (1668bp) protein (556aa)
NAD synthetase {ECO:0000313|EMBL:KKB82983.1}; EC=6.3.5.1 {ECO:0000313|EMBL:KKB82983.1};; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;
NAD synthetase / glutamine amidotransferase chain of NAD synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF53_PELHB
NAD synthetase
Displaying items 1-30 of 95 in total

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