Alias: PEL42_21
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_309_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(299..439)
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Flp pilus assembly protein, pilin Flp {ECO:0000313|EMBL:KFC61350.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
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cn_combo_scaffold_309_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(510..1043)
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Periplasmic protein thiol--disulfide oxidoreductase DsbE n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N394_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07785.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
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cn_combo_scaffold_309_3
unknown
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Not on your lists |
comp(1043..1189)
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This feature has no annotations |
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cn_combo_scaffold_309_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1186..1950)
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Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R708_PELHB
Heme transporter HemC {ECO:0000313|EMBL:KKB07784.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cytochrome c-type biogenesis protein CcmC heme lyase for CcmE
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cn_combo_scaffold_309_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1996..2661)
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Heme exporter protein B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R709_PELHB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
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cn_combo_scaffold_309_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2658..3284)
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Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3F87B
heme exporter protein CcmA
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cn_combo_scaffold_309_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3439..6192
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Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=429727 species="Bacteria; Proteobacteria; Alph
Aconitate hydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R711_PELHB
aconitate hydratase
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cn_combo_scaffold_309_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6594..7337
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Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Z0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08311.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
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cn_combo_scaffold_309_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7607..7990
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Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30201.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
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cn_combo_scaffold_309_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7987..8487
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GNAT family acetyltransferase (EC:2.3.1.-)
GNAT family acetyltransferase n=3 Tax=Rhodobacter capsulatus RepID=V8GZ20_RHOCA
Uncharacterized protein {ECO:0000313|EMBL:KFL30200.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
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cn_combo_scaffold_309_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(8423..8977)
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Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BI48_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48456.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
grpB; UPF0157 protein
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cn_combo_scaffold_309_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8982..9479)
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pat; phosphinothricin N-acetyltransferase Pat (EC:2.3.1.183)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNH4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KKB07779.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
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cn_combo_scaffold_309_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9578..10303)
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Membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y8_PELHB
Membrane protein {ECO:0000313|EMBL:KFL30197.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
rbh
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cn_combo_scaffold_309_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10505..11044
|
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=429727 species="Ba
2'-5' RNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y7_PELHB
2'-5' RNA ligase
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cn_combo_scaffold_309_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11261..11782
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Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08310.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
|
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cn_combo_scaffold_309_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11872..12375
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Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07776.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
|
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cn_combo_scaffold_309_17
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12649..13857
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Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y4_PELHB
ribosomal RNA large subunit methyltransferase N
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cn_combo_scaffold_309_18
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13960..14808)
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Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y1_PELHB
protein involved in catabolism of external DNA
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cn_combo_scaffold_309_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14828..15475)
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Lysine exporter protein (LYSE/YGGA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y0_PELHB
Threonine transporter RhtB {ECO:0000313|EMBL:KKB07774.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
lysine exporter protein LysE/YggA
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cn_combo_scaffold_309_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15569..16033)
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Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JA14_AGRRK
AsnC family transcriptional regulator {ECO:0000313|EMBL:KKB07773.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
transcriptional regulator
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cn_combo_scaffold_309_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16162..17385
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Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X9_PELHB
argininosuccinate synthase
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cn_combo_scaffold_309_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
17566..18144
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chloramphenicol phosphotransferase n=1 Tax=Rhizobium loti RepID=UPI00036BEFB0
Uncharacterized protein {ECO:0000313|EMBL:KKB07771.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
chloramphenicol phosphotransferase family protein
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cn_combo_scaffold_309_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18225..20351
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Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07770.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
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cn_combo_scaffold_309_24
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20619..22409
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GTP-binding protein TypA/BipA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X5_PELHB
GTP-binding protein TypA {ECO:0000313|EMBL:KKB78972.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
GTP-binding protein TypA
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cn_combo_scaffold_309_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22549..23169
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SNARE associated Golgi protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VX54_METEP
Alkaline phosphatase {ECO:0000313|EMBL:KKB07766.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
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cn_combo_scaffold_309_26
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23224..24117
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Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9P3_PELHB
iron(III) dicitrate transport system, periplasmic iron-binding protein FecB
rbh
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB {ECO:0000313|EMBL:AEQ51450.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicro
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cn_combo_scaffold_309_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24418..24720
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P574_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB07765.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
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cn_combo_scaffold_309_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24701..25036
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UPF0235 protein RHSP_37470 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAT2_9RHIZ
UPF0235 protein VE26_13990 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatens
hypothetical protein
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cn_combo_scaffold_309_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
25199..27313
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K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6W4_PELHB
pyrophosphate-energized proton pump
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cn_combo_scaffold_309_30
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(27466..27897)
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MarR family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2T703_RHORU
MarR family transcriptional regulator {ECO:0000313|EMBL:KKC31674.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psy
MarR family transcriptional regulator
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