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cn_combo_scaffold_374

Alias: PEL42_22

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_374_1
unknown

Not on your lists

3..146
DNA (144bp) protein (48aa)

This feature has no annotations

cn_combo_scaffold_374_2
unknown

Not on your lists

156..578
DNA (423bp) protein (141aa)

This feature has no annotations

cn_combo_scaffold_374_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(609..1421)
DNA (813bp) protein (271aa)
Transcriptional regulator, DeoR family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5W5_9RHOB
Glycerol-3-phosphate regulon repressor GlpR {ECO:0000313|EMBL:CDP52054.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
DeoR faimly transcriptional regulator
cn_combo_scaffold_374_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1418..2434)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000360B1C8
Uncharacterized protein {ECO:0000313|EMBL:KKB08874.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_374_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2473..3462)
DNA (990bp) protein (330aa)
Iron ABC transporter substrate binding protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A9S0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KKB86526.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
ABC transporter substrate binding protein
cn_combo_scaffold_374_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3593..4654
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ49_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB08873.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter ATP-binding protein
cn_combo_scaffold_374_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4658..6301
DNA (1644bp) protein (548aa)
Putative ABC-type Fe3+ transport system, permease component n=1 Tax=Vibrio nigripulchritudo RepID=U4KIX8_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KKB08872.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative ABC-type Fe3+ transport system, permease component
cn_combo_scaffold_374_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6744..8396)
DNA (1653bp) protein (551aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E212_CARML
Iron ABC transporter permease {ECO:0000313|EMBL:KKB85097.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 1
bitE; binding--dependent transport system inner membrane component family protein
cn_combo_scaffold_374_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8393..9478)
DNA (1086bp) protein (362aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Carnobacterium maltaromaticum RepID=UPI00026C8C01
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB85096.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
peptide ABC transporter substrate-binding protein
cn_combo_scaffold_374_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9510..10529)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI000365DECC
Uncharacterized protein {ECO:0000313|EMBL:KKB85095.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
iron ABC transporter substrate-binding protein
cn_combo_scaffold_374_11
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10813..11049)
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS10186.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
cn_combo_scaffold_374_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11060..11668)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXP9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30978.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
nifu protein
cn_combo_scaffold_374_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11687..13015)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNB8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62279.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
cn_combo_scaffold_374_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13068..13334)
DNA (267bp) protein (89aa)
Hemerythrin HHE cation binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05003.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
cn_combo_scaffold_374_15
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13489..13716
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000369BE8E
Uncharacterized protein {ECO:0000313|EMBL:KJS10184.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
cn_combo_scaffold_374_16
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13716..14186
DNA (471bp) protein (157aa)
Nitrite-sensitive transcriptional repressor NsrR n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RBB4_9RHIZ
Nitrite-sensitive transcriptional repressor NsrR {ECO:0000313|EMBL:ESR23426.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="L
BadM/Rrf2 family transcriptional regulator
cn_combo_scaffold_374_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14196..15869
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W863_9BURK
cn_combo_scaffold_374_18
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15895..16125
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWS5_9RHIZ
Peroxidase {ECO:0000313|EMBL:EZQ16114.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
cn_combo_scaffold_374_19
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16132..16563)
DNA (432bp) protein (144aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UL98_SINMW
cn_combo_scaffold_374_20
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16560..17870)
DNA (1311bp) protein (437aa)
TRAP transporter, DctM subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPR3_9RHIZ
Permease {ECO:0000313|EMBL:KKC34005.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
TRAP dicarboxylate transporter subunit DctM
cn_combo_scaffold_374_21
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17867..18385)
DNA (519bp) protein (173aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPR2_9RHIZ
TRAP-type C4-dicarboxylate transport system small permease component-like protein {ECO:0000313|EMBL:KFC68067.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
tripartite ATP-independent periplasmic transporter DctQ
cn_combo_scaffold_374_22
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18473..19453)
DNA (981bp) protein (327aa)
C4-dicarboxylate ABC transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D44441
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KKB85191.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DS
TRAP dicarboxylate transporter subunit DctP
cn_combo_scaffold_374_23
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19692..20369
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R784_PELHB
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB85192.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia li
GntR family transcriptional regulator
cn_combo_scaffold_374_24
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20691..21083
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFK0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP53081.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
cn_combo_scaffold_374_25
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21126..22340
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A3C2
phospholipase D domain-containing protein rbh
Phospholipase D domain-containing protein {ECO:0000313|EMBL:AIC31333.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
cn_combo_scaffold_374_trna_2
unknown

Not on your lists

comp(22564..22653)
DNA (90bp)
transferRNA
cn_combo_scaffold_374_26
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22874..23644
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A6B5FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14417.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (st
cn_combo_scaffold_374_27
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23680..24321)
DNA (642bp) protein (214aa)
Glutathione S-transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGM7_PELHB
Glutathione S-transferase {ECO:0000313|EMBL:KKC34609.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
glutathione S-transferase
cn_combo_scaffold_374_28
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24436..24876)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGM6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34610.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
cn_combo_scaffold_374_29
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25187..25957
DNA (771bp) protein (257aa)
Putative permease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGM5_PELHB
Permease {ECO:0000313|EMBL:KKC34611.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative permease
Displaying items 1-30 of 90 in total

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