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cn_combo_scaffold_371

Alias: PEL42_24

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Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_371_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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128..988
DNA (861bp) protein (287aa)
Transposase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98A49_RHILO
Transposase {ECO:0000313|EMBL:KKC31742.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transposase
cn_combo_scaffold_371_2
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(975..1559)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000373A64D
Uncharacterized protein {ECO:0000313|EMBL:KKB11867.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
cn_combo_scaffold_371_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2025..3512
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003020B04
Uncharacterized protein {ECO:0000313|EMBL:AHY55116.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
cn_combo_scaffold_371_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3567..3893)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KZ3_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61932.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
cn_combo_scaffold_371_5

Not on your lists

comp(4703..5635)
DNA (933bp) protein (311aa)
UPI0003CF7940 related cluster n=1 Tax=unknown RepID=UPI0003CF7940
Uncharacterized protein {ECO:0000313|EMBL:KKN19172.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
cn_combo_scaffold_371_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5976..7016)
DNA (1041bp) protein (347aa)
DNA primase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313A906
Uncharacterized protein {ECO:0000313|EMBL:CCV09132.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
cn_combo_scaffold_371_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7080..9149)
DNA (2070bp) protein (690aa)
DNA-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F18985
ParB domain-containing protein nuclease
ParB domain protein nuclease {ECO:0000313|EMBL:ADU42507.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
cn_combo_scaffold_371_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9275..10468)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002DD6221
Uncharacterized protein {ECO:0000313|EMBL:GAN75837.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera ru
hypothetical protein
cn_combo_scaffold_371_9
unknown

Not on your lists

10655..11449
DNA (795bp) protein (265aa)

This feature has no annotations

cn_combo_scaffold_371_10
unknown

Not on your lists

11661..12248
DNA (588bp) protein (196aa)

This feature has no annotations

cn_combo_scaffold_371_11
unknown

Not on your lists

12889..14454
DNA (1566bp) protein (522aa)

This feature has no annotations

cn_combo_scaffold_371_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14554..15420
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2V0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN13516.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
cn_combo_scaffold_371_13
unknown

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15413..16009
DNA (597bp) protein (199aa)

This feature has no annotations

cn_combo_scaffold_371_14
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16021..17739
DNA (1719bp) protein (573aa)
Type IV secretory pathway, VirD4 component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CVF7_9BRAD
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EJN13514.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brady
hypothetical protein
cn_combo_scaffold_371_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17876..20542
DNA (2667bp) protein (889aa)
Conjugative relaxase domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P499_9BRAD
Conjugative relaxase domain-containing protein {ECO:0000313|EMBL:EKS37382.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
ATP-dependent exoDNAse
cn_combo_scaffold_371_16
unknown

Not on your lists

20535..20729
DNA (195bp) protein (65aa)

This feature has no annotations

cn_combo_scaffold_371_17
unknown

Not on your lists

20722..21192
DNA (471bp) protein (157aa)

This feature has no annotations

cn_combo_scaffold_371_18
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21310..22962
DNA (1653bp) protein (551aa)
Resolvase domain n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L165_METC4
Resolvase domain rbh
Resolvase domain {ECO:0000313|EMBL:ACK84987.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium exto
cn_combo_scaffold_371_trna_2
unknown

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comp(22936..23009)
DNA (74bp)
transferRNA
cn_combo_scaffold_371_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23131..24570)
DNA (1440bp) protein (480aa)
Signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGE8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07379.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
signal transduction histidine kinase
cn_combo_scaffold_371_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24616..26043)
DNA (1428bp) protein (476aa)
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LG9_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKB07380.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
cn_combo_scaffold_371_21
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26417..26818
DNA (402bp) protein (134aa)
Ribonuclease P protein component n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R1R9_9RHOB
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
rnpA; Ribonuclease P protein component
cn_combo_scaffold_371_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26815..28656
DNA (1842bp) protein (614aa)
Membrane protein insertase YidC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGE4_PELHB
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
inner membrane protein translocase component YidC, long form
cn_combo_scaffold_371_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28723..29367
DNA (645bp) protein (215aa)
Probable GTP-binding protein EngB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGE3_PELHB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
GTP-binding protein EngB
cn_combo_scaffold_371_24
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29369..30073)
DNA (705bp) protein (235aa)
Glutamine amidotransferase, class I n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGE2_PELHB
Glutamine amidotransferase {ECO:0000313|EMBL:KFL32785.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutamine amidotransferase
cn_combo_scaffold_371_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30171..30641)
DNA (471bp) protein (157aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Uncharacterized protein {ECO:0000313|EMBL:KKB07386.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Methionine-R-sulfoxide reductase id=2927480 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
cn_combo_scaffold_371_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30712..32022)
DNA (1311bp) protein (437aa)
Protein TolB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R978_PELHB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
TolB protein
cn_combo_scaffold_371_27
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32085..33215)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R979_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76029.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cn_combo_scaffold_371_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33225..33662)
DNA (438bp) protein (146aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R980_PELHB
Biopolymer transporter ExbD {ECO:0000313|EMBL:KKB07389.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.
biopolymer transport protein ExbD/TolR
cn_combo_scaffold_371_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33664..34374)
DNA (711bp) protein (237aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R981_PELHB
Biopolymer transporter ExbB {ECO:0000313|EMBL:KKB08229.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.
MotA/TolQ/ExbB proton channel family protein rbh
Displaying items 1-30 of 132 in total

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