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cn_combo_scaffold_411

Alias: PEL42_26

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Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_411_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..898
DNA (897bp) protein (299aa)
Transporter of small molecules n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R820_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB09350.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
transporter of small molecules
cn_combo_scaffold_411_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1040..1789
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R821_PELHB
Xylose isomerase {ECO:0000313|EMBL:KKB09351.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_411_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1795..2937
DNA (1143bp) protein (381aa)
Putative oxidoreductase protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R822_PELHB
Oxidoreductase {ECO:0000313|EMBL:KFL31708.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative oxidoreductase protein
cn_combo_scaffold_411_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3101..4159
DNA (1059bp) protein (353aa)
Inosose isomerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R823_PELHB
AP endonuclease {ECO:0000313|EMBL:KFL31709.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
inosose isomerase
cn_combo_scaffold_411_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4273..5424
DNA (1152bp) protein (384aa)
Oxidoreductase domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R824_PELHB
Oxidoreductase {ECO:0000313|EMBL:KKB09354.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
oxidoreductase domain-containing protein
cn_combo_scaffold_411_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5673..6539)
DNA (867bp) protein (289aa)
GumN family protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AA818B
Uncharacterized protein {ECO:0000313|EMBL:KKB09355.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
GumN family protein
cn_combo_scaffold_411_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6637..6942)
DNA (306bp) protein (102aa)
Oxidoreductase, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R829_PELHB
ETC complex I subunit {ECO:0000313|EMBL:KKB09356.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
oxidoreductase
cn_combo_scaffold_411_trna_3
unknown

Not on your lists

comp(6972..7045)
DNA (74bp)
transferRNA
cn_combo_scaffold_411_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7148..7885
DNA (738bp) protein (246aa)
Phosphoesterase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UA87_9RHOB
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:KFC69957.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
phosphoesterase, PA-phosphatase-like protein
cn_combo_scaffold_411_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7867..9054)
DNA (1188bp) protein (396aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KKB09357.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KKB09357.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Cystathionine beta-lyase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R831_PELHB
cystathionine beta-lyase
cn_combo_scaffold_411_10
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9273..10289
DNA (1017bp) protein (339aa)
Glutamate aspartate periplasmic binding protein GltI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R832_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC32076.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
glutamate aspartate periplasmic binding protein GltI rbh
cn_combo_scaffold_411_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10459..11649
DNA (1191bp) protein (397aa)
Amino acid ABC transporter, permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R833_PELHB
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKB82763.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi
amino acid ABC transporter permease
cn_combo_scaffold_411_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11658..12794
DNA (1137bp) protein (379aa)
Glutamate aspartate transport system permease protein GltK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R834_PELHB
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKB12803.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geoje
glutamate aspartate transport system permease protein GltK rbh
cn_combo_scaffold_411_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12801..13601
DNA (801bp) protein (267aa)
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R835_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31717.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
polar amino acid ABC transporter ATPase
cn_combo_scaffold_411_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13908..14933
DNA (1026bp) protein (342aa)
ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R836_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10293.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glutamate/glutamine/aspartate/asparagine ABC transporter substrate-binding protein
cn_combo_scaffold_411_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15014..15727)
DNA (714bp) protein (238aa)
Alanyl-transfer RNA synthetase domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXB9_POLGS
Ala-tRNA(Pro) hydrolase {ECO:0000313|EMBL:KKB09362.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
alaS2; alanyl-tRNA synthetase
cn_combo_scaffold_411_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15737..17188)
DNA (1452bp) protein (484aa)
Cardiolipin synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R837_PELHB
Cardiolipin synthase {ECO:0000313|EMBL:KKB10294.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Cardiolipin synthetase
cn_combo_scaffold_411_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17250..18401)
DNA (1152bp) protein (384aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R838_PELHB
Cysteine synthase {ECO:0000313|EMBL:KKB09363.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
cn_combo_scaffold_411_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18526..18972)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R844_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09364.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_411_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18969..20189)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI00036B6A2B
Fosmidomycin resistance protein {ECO:0000313|EMBL:KKB09365.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhaten
major facilitator transporter
cn_combo_scaffold_411_trna_2
unknown

Not on your lists

comp(20289..20361)
DNA (73bp)
transferRNA
cn_combo_scaffold_411_20
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20458..21045)
DNA (588bp) protein (196aa)
Molybdopterin-guanine dinucleotide biosynthesis protein MobA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R850_PELHB
Molybdopterin-guanine dinucleotide biosynthesis protein MobA {ECO:0000313|EMBL:KFC69967.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
molybdopterin-guanine dinucleotide biosynthesis protein MobA
cn_combo_scaffold_411_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21042..22223)
DNA (1182bp) protein (394aa)
Benzoate transport protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJ27_9PROT
Benzoate transporter {ECO:0000313|EMBL:KKB09366.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Benzoate transport protein
cn_combo_scaffold_411_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22276..22488)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB09367.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_411_trna_1
unknown

Not on your lists

22573..22643
DNA (71bp)
transferRNA
cn_combo_scaffold_411_23
unknown

Not on your lists

22742..22909
DNA (168bp) protein (56aa)

This feature has no annotations

cn_combo_scaffold_411_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23175..24542
DNA (1368bp) protein (456aa)
Type I secretion outer membrane protein, TolC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAG0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09437.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
type I secretion outer membrane protein, TolC
cn_combo_scaffold_411_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24735..25502
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAF9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09438.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_411_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25619..28372
DNA (2754bp) protein (918aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXI0_PARL1
valS; valyl-tRNA synthetase
cn_combo_scaffold_411_27
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28411..30258)
DNA (1848bp) protein (616aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W344_RHILT
Thiamine ABC transporter permease {ECO:0000313|EMBL:KKB79788.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
multidrug resistance ABC transporter, ATP-binding and permease rbh
Displaying items 1-30 of 90 in total

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