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cn_combo_scaffold_432

Alias: PEL42_27

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_432_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2316)
DNA (2316bp) protein (772aa)
Cell division protein FtsK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P2_PELHB
Cell division protein FtsK {ECO:0000313|EMBL:KFC64327.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
DNA translocase FtsK
cn_combo_scaffold_432_2
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2657..3973)
DNA (1317bp) protein (439aa)
Ammonium transporter n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUZ9_9GAMM
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
ammonium transporter
cn_combo_scaffold_432_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4440..5660
DNA (1221bp) protein (407aa)
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7N9_PELHB
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:KKC33019.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
2-octaprenyl-6-methoxyphenol hydroxylase
cn_combo_scaffold_432_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6062..6292)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7N8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC33018.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
cn_combo_scaffold_432_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6295..6966)
DNA (672bp) protein (224aa)
Uncharacterized protein, similar to the N-terminal domain of Lon protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7N7_PELHB
Peptidase S16 {ECO:0000313|EMBL:KKC37831.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
cn_combo_scaffold_432_6
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6975..7922)
DNA (948bp) protein (316aa)
Thioredoxin domain-containing protein EC-YbbN n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QW23_9RHIZ
Thioredoxin {ECO:0000313|EMBL:KKC37832.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
thioredoxin
cn_combo_scaffold_432_trna_1
unknown

Not on your lists

8128..8199
DNA (72bp)
transferRNA
cn_combo_scaffold_432_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8308..9195)
DNA (888bp) protein (296aa)
Transcriptional regulator, lysR family n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7DCE4_PHAG2
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL29679.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribo
LysR family transcriptional regulator
cn_combo_scaffold_432_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9285..9923
DNA (639bp) protein (213aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EZU0_9CYAN
SAM-dependent methyltransferase {ECO:0000313|EMBL:KFL29680.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavin
type 11 methyltransferase
cn_combo_scaffold_432_9
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10024..11082)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000366E308
Uncharacterized protein {ECO:0000313|EMBL:KFI29898.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
beta-lactamase domain protein
cn_combo_scaffold_432_10
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11079..12755)
DNA (1677bp) protein (559aa)
ABC-type Fe3+ transport system, permease component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y091_PARAH
ABC-type Fe3+ transport system, permease component rbh
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:AGT10957.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;"
cn_combo_scaffold_432_11
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12769..13722)
DNA (954bp) protein (318aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YHL7_PARAH
ABC-type Fe3+ transport system, periplasmic component rbh
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:AGT10958.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus
cn_combo_scaffold_432_12
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13732..14817)
DNA (1086bp) protein (362aa)
ABC transporter related protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F183_KETVY
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADO43867.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ket
cn_combo_scaffold_432_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15155..16129)
DNA (975bp) protein (325aa)
oxidoreductase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B4B072
Uncharacterized protein {ECO:0000313|EMBL:KGM36017.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
oxidoreductase
cn_combo_scaffold_432_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16126..17109)
DNA (984bp) protein (328aa)
Putative dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQP3_9RHIZ
Putative dehydrogenase {ECO:0000313|EMBL:EIM26285.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidi
oxidoreductase
cn_combo_scaffold_432_15
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17109..17888)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KWG2_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST33319.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
ABC transporter
cn_combo_scaffold_432_16
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17885..18724)
DNA (840bp) protein (280aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C265_BEUC1
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) {ECO:0000313|EMBL:CEL20801.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangi
peptide ABC transporter ATPase
cn_combo_scaffold_432_17
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18721..20232)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B76AE3
family 5 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACQ81691.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia caver
cn_combo_scaffold_432_18
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20274..21146)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KMS6_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST33323.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
cn_combo_scaffold_432_19
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21143..22072)
DNA (930bp) protein (310aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C268_BEUC1
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ81693.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" sou
cn_combo_scaffold_432_20
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22077..23012)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B4E8F7
Uncharacterized protein {ECO:0000313|EMBL:EST33315.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
dihydrodipicolinate synthetase
cn_combo_scaffold_432_21
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23014..24627)
DNA (1614bp) protein (538aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQB5_9RHIZ
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KKB13341.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
FAD-dependent oxidoreductase rbh
cn_combo_scaffold_432_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24624..25652)
DNA (1029bp) protein (343aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L8K9_9RHIZ
LacI family transcriptional regulator {ECO:0000313|EMBL:KKB13340.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo
LacI family transcriptional regulator protein
cn_combo_scaffold_432_23
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25931..26731)
DNA (801bp) protein (267aa)
Transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRR6_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EKE78138.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibacul
IclR family transcriptional regulator
cn_combo_scaffold_432_24
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26761..27603)
DNA (843bp) protein (281aa)
ABC transporter ATP-binding protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000287A912
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL08331.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobac
ABC transporter-like protein
cn_combo_scaffold_432_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27600..28439)
DNA (840bp) protein (280aa)
Peptide ABC transporter ATP-binding protein n=2 Tax=Labrenzia RepID=U7FIS6_9RHOB
ABC transporter family protein {ECO:0000313|EMBL:AID34231.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
ABC transporter ATP-binding protein
cn_combo_scaffold_432_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28443..29357)
DNA (915bp) protein (305aa)
ABC-type transporter, integral membrane subunit n=8 Tax=Rhizobium meliloti RepID=F6BSV4_SINMB
dppC1; Dipeptide transport system permease protein dppC
ABC transporter, permease {ECO:0000313|EMBL:AEH77662.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" s
cn_combo_scaffold_432_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29371..30366)
DNA (996bp) protein (332aa)
ABC transporter integral membrane protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3P9_9RHIZ
ABC transporter integral membrane protein {ECO:0000313|EMBL:EHK52398.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
nickel-transporting ATPase
cn_combo_scaffold_432_28
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30438..32054)
DNA (1617bp) protein (539aa)
Dipeptide transport protein (ABC superfamily, peri_bind) n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYA0_KETVY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGB80821.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;"
dppA; dipeptide ABC transporter substrate-binding protein
cn_combo_scaffold_432_29
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32170..33507
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003600380
FAD dependent oxidoreductase {ECO:0000313|EMBL:KCV59016.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronc
FAD dependent oxidoreductase
Displaying items 1-30 of 88 in total

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