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cn_combo_scaffold_563

Alias: PEL42_30

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_563_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2334)
DNA (2334bp) protein (778aa)
cell division protein FtsK n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D7E421
Cell division protein FtsK {ECO:0000313|EMBL:KKB08355.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
ftsK2; cell division protein
cn_combo_scaffold_563_2
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2565..3914)
DNA (1350bp) protein (450aa)
Ammonium transporter n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y926_9RHOO
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudin
ammonia channel protein
cn_combo_scaffold_563_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3935..4273)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P0_PELHB
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KKB81882.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insul
nitrogen regulatory protein P-II
cn_combo_scaffold_563_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4545..5771
DNA (1227bp) protein (409aa)
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7N9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07965.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
2-octaprenyl-6-methoxyphenol hydroxylase
cn_combo_scaffold_563_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5964..6596
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQ63_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC64339.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
cn_combo_scaffold_563_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6705..7031
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDW5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB78667.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cn_combo_scaffold_563_7
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7096..7464
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003820992
Uncharacterized protein {ECO:0000313|EMBL:KKB81968.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
cn_combo_scaffold_563_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7551..8339
DNA (789bp) protein (263aa)
Amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Pseudovibrio RepID=G8PQR4_PSEUV
Amino acid ABC transporter {ECO:0000313|EMBL:KKB07941.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
amino acid ABC transporter, periplasmic amino acid-binding protein
cn_combo_scaffold_563_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8509..9330
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364CA32
Amino acid ABC transporter {ECO:0000313|EMBL:KKB07942.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
polar amino acid ABC transporter inner membrane subunit
cn_combo_scaffold_563_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9391..9921
DNA (531bp) protein (177aa)
Protein creA n=1 Tax=Rhizobium sp. RepID=L0NG52_RHISP
CREA protein {ECO:0000313|EMBL:KKB07943.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
CREA protein
cn_combo_scaffold_563_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10091..10726
DNA (636bp) protein (212aa)
Alkyl hydroperoxide reductase subunit C-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDW4_PELHB
Peroxidase {ECO:0000313|EMBL:KFL32323.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
alkyl hydroperoxide reductase
cn_combo_scaffold_563_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11238..11591
DNA (354bp) protein (118aa)
Rare lipoprotein A n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SG85_9CYAN
Lipoprotein {ECO:0000313|EMBL:KKB07944.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
rare lipoprotein A
cn_combo_scaffold_563_13
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11787..12770)
DNA (984bp) protein (328aa)
Putative oxidoreductase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K878_SACES
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CCH33732.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
cn_combo_scaffold_563_14
unknown

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comp(12782..12931)
DNA (150bp) protein (50aa)

This feature has no annotations

cn_combo_scaffold_563_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13111..14007
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FN41_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32319.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LysR family transcriptional regulator
cn_combo_scaffold_563_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14068..14625
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB76367.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
cn_combo_scaffold_563_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14763..15935
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS_1 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0A4_LEPCP
MFS transporter {ECO:0000313|EMBL:KKB07945.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
major facilitator transporter
cn_combo_scaffold_563_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15932..17122
DNA (1191bp) protein (397aa)
Nitrate/nitrite transporter n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BEI2_RHILV
Major facilitator transporter {ECO:0000313|EMBL:KKB07946.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
transmembrane transporter
cn_combo_scaffold_563_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17115..17579
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA36_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07947.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_563_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17589..18722
DNA (1134bp) protein (378aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJJ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07948.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
major facilitator superfamily protein
cn_combo_scaffold_563_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18712..19620)
DNA (909bp) protein (303aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R997_PELHB
tRNA pseudouridine synthase B
cn_combo_scaffold_563_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19623..20036)
DNA (414bp) protein (138aa)
Ribosome-binding factor A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R996_PELHB
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
ribosome-binding factor A
cn_combo_scaffold_563_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20070..20732)
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07951.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_563_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20900..21856)
DNA (957bp) protein (319aa)
Glyoxylate reductase / glyoxylate reductase / hydroxypyruvate reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A4_PELHB
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKB07952.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.
glyoxylate reductase / glyoxylate reductase / hydroxypyruvate reductase
cn_combo_scaffold_563_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22023..22577
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07953.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_563_26
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22584..25499)
DNA (2916bp) protein (972aa)
Putative 4Fe-4S ferredoxin, oxidoreductase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVS0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KFL30329.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
4Fe-4S ferredoxin
cn_combo_scaffold_563_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25542..26465)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NXP7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KKB07954.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_563_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26847..28142
DNA (1296bp) protein (432aa)
Family 1 extracellular solute-binding protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4T8I0_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB07955.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
hypothetical protein
cn_combo_scaffold_563_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28202..29104
DNA (903bp) protein (301aa)
Putative ABC transporter permease protein YesP n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X234_RHIFR
ABC transporter permease {ECO:0000313|EMBL:KKB08350.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
yesP; sn-glycerol-3-phosphate transport system permease protein ugpA
cn_combo_scaffold_563_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29094..29981
DNA (888bp) protein (296aa)
sugar ABC transporter permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B6CB39
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB08351.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatens
sugar ABC transporter permease
Displaying items 1-30 of 73 in total

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