ggKbase home page

cn_combo_scaffold_632

Alias: PEL42_33

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_632_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..619
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R695_PELHB
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
50S ribosomal protein L25
cn_combo_scaffold_632_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

690..1397
DNA (708bp) protein (236aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP85_9RHIZ
cn_combo_scaffold_632_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2319..3416)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6M9_PELHB
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
GTP-binding and nucleic acid-binding protein YchF rbh
cn_combo_scaffold_632_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3658..4137
DNA (480bp) protein (160aa)
MaoC domain protein dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6N5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07241.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
acyl dehydratase MaoC
cn_combo_scaffold_632_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4134..4691
DNA (558bp) protein (186aa)
MaoC-like dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6N6_PELHB
MaoC-like dehydratase {ECO:0000313|EMBL:CDP50217.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
acyl dehydratase MaoC
cn_combo_scaffold_632_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4724..5068
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07242.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_632_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5204..6223
DNA (1020bp) protein (340aa)
Integral membrane protein TerC n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JLN9_9RHIZ
Membrane protein {ECO:0000313|EMBL:KKB11815.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
integral membrane protein TerC
cn_combo_scaffold_632_8
unknown

Not on your lists

6568..6741
DNA (174bp) protein (58aa)

This feature has no annotations

cn_combo_scaffold_632_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6838..7230
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B42D18
Uncharacterized protein {ECO:0000313|EMBL:KKB07243.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase family protein
cn_combo_scaffold_632_10
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7313..7711
DNA (399bp) protein (133aa)
Glutathione-dependent formaldehyde-activating enzyme family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QQZ1_9CAUL
Aldehyde-activating protein {ECO:0000313|EMBL:KKC37387.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihi
glutathione-dependent formaldehyde-activating gfa
cn_combo_scaffold_632_11
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7725..8258)
DNA (534bp) protein (178aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P0_PELHB
adenine phosphoribosyltransferase
cn_combo_scaffold_632_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8284..8478)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07246.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_632_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8871..9746)
DNA (876bp) protein (292aa)
Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08201.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
cn_combo_scaffold_632_14
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9743..10993)
DNA (1251bp) protein (417aa)
Cytochrome b n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P3_PELHB
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ubiquinol--cytochrome c reductase, cytochrome B subunit
cn_combo_scaffold_632_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11008..11535)
DNA (528bp) protein (176aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P4_PELHB
ubiquinol-cytochrome C reductase iron-sulfur subunit
cn_combo_scaffold_632_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11750..12220
DNA (471bp) protein (157aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P5_PELHB
tRNA (cytosine34-2'-O-)-methyltransferase
cn_combo_scaffold_632_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12238..13110
DNA (873bp) protein (291aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobia
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P6_PELHB
Coproporphyrinogen III oxidase, aerobic
cn_combo_scaffold_632_18
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13177..13365
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P7_PELHB
Small metal-binding protein {ECO:0000313|EMBL:KKB13543.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
cn_combo_scaffold_632_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13362..14555)
DNA (1194bp) protein (398aa)
tRNA nucleotidyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07253.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
tRNA nucleotidyltransferase
cn_combo_scaffold_632_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14552..15178)
DNA (627bp) protein (209aa)
Putative nudix hydrolase YeaB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6P9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31998.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative nudix hydrolase YeaB
cn_combo_scaffold_632_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15256..15804)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08203.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_632_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16162..17121
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JZ75_AGRVS
Glutathionyl-hydroquinone reductase YqjG {ECO:0000313|EMBL:KKB07254.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
hypothetical protein
cn_combo_scaffold_632_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17199..17672)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08204.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_632_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17786..18676
DNA (891bp) protein (297aa)
Putative phosphohydrolase, Icc family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07255.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative phosphohydrolase, Icc family
cn_combo_scaffold_632_25
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18689..19351)
DNA (663bp) protein (221aa)
Glutathione S-transferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZYI0_9SPHN
Glutathione S-transferase {ECO:0000313|EMBL:EJL23734.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
glutathione S-transferase
cn_combo_scaffold_632_26
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19460..19828
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4Q066_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KKC34647.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
cn_combo_scaffold_632_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19897..21228
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07256.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_632_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21218..22510
DNA (1293bp) protein (431aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|SAAS:SAAS00084342};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q5_PELHB
UDP-N-acetylmuramoylalanine--D-glutamate ligase
cn_combo_scaffold_632_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22595..24331)
DNA (1737bp) protein (579aa)
Adenylate cyclase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6R3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07258.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
adenylate cyclase rbh
cn_combo_scaffold_632_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24614..25060
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6R4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07259.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
Displaying items 1-30 of 71 in total

View Taxonomy