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cn_combo_scaffold_644

Alias: PEL42_35

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_644_1
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75..1049)
DNA (975bp) protein (325aa)
dapA3; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXM3_BORPD
cn_combo_scaffold_644_2
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1076..1912)
DNA (837bp) protein (279aa)
Serine O-acetyltransferase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VG53_9RHIZ
Serine O-acetyltransferase {ECO:0000313|EMBL:EJN04977.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacter
serine O-acetyltransferase
cn_combo_scaffold_644_3
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1891..2610)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4NXR3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ80701.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
cn_combo_scaffold_644_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2837..4333
DNA (1497bp) protein (499aa)
peptidase S41 n=1 Tax=Xanthobacteraceae RepID=UPI0003603A8A
fixN; cbb3-type cytochrome c oxidase subunit I rbh
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:AFK54117.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="
cn_combo_scaffold_644_5
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4374..5117
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003607189
FixO1 cytochrome C oxidase subunit
FixO1 cytochrome C oxidase subunit {ECO:0000313|EMBL:AFK54118.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistre
cn_combo_scaffold_644_6
unknown

Not on your lists

5121..5279
DNA (159bp) protein (53aa)

This feature has no annotations

cn_combo_scaffold_644_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5276..6145
DNA (870bp) protein (290aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMY2_TISMK
petJ; cytochrome-c oxidase subunit FixP rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="
cn_combo_scaffold_644_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6146..7594
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003824519
fixG; cytochrome c oxidase accessory protein CcoG
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:AFK54121.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" sourc
cn_combo_scaffold_644_9
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7591..8088
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036887FF
nitrogen fixation protein fixH
Nitrogen fixation protein fixH {ECO:0000313|EMBL:AFK54122.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella
cn_combo_scaffold_644_10
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8085..10304
DNA (2220bp) protein (740aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoI {ECO:0000313|EMBL:GAM98180.1}; EC=3.6.3.4 {ECO:0000313|EMBL:GAM98180.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" s
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036F2A2B
fixI; nitrogen fixation protein FixI (coupling cation pump)
cn_combo_scaffold_644_11
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10301..10459
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037CE79E
Nitrogen fixation protein FixS {ECO:0000313|EMBL:GAK33103.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
ccoS; cytochrome oxidase maturation protein, cbb3-type
cn_combo_scaffold_644_12
unknown

Not on your lists

10456..10875
DNA (420bp) protein (140aa)

This feature has no annotations

cn_combo_scaffold_644_13
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10958..11617
DNA (660bp) protein (220aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoxyribose-phosphate aldolase (EC:4.1.2.4)
deoxyribose-phosphate aldolase n=1 Tax=Bacillus oceanisediminis RepID=UPI0002DF962F
cn_combo_scaffold_644_14
Acetobacter indonesiensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11632..12798
DNA (1167bp) protein (389aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1231340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetob
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VHR5_9PROT
cn_combo_scaffold_644_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12798..14042
DNA (1245bp) protein (415aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=391937 species="Bacteria; Prot
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDB7_9RHIZ
cn_combo_scaffold_644_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14035..15225
DNA (1191bp) protein (397aa)
aspC; aromatic amino acid aminotransferase (EC:2.6.1.57)
Putative aspartate aminotransferase {ECO:0000313|EMBL:CAK09956.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CAK09956.1};; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia
Putative aspartate aminotransferase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MAS9_RHIL3
cn_combo_scaffold_644_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15239..16066)
DNA (828bp) protein (276aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000373B55A
methylenetetrahydrofolate reductase
cn_combo_scaffold_644_18
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16122..16457)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000368B7D3
4Fe-4S ferredoxin, iron-sulfur binding
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:BAQ16603.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacte
cn_combo_scaffold_644_19
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16674..18017
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P2I2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81394.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
hypothetical protein
cn_combo_scaffold_644_20
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18035..19036
DNA (1002bp) protein (334aa)
Nitrilase n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4QQD0_9CAUL
Nitrilase {ECO:0000313|EMBL:ESQ81393.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DS
putative amidohydrolase
cn_combo_scaffold_644_21
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19024..20439
DNA (1416bp) protein (472aa)
cytochrome bd-type quinol oxidase, subunit 1 (EC:1.10.3.-)
Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4NHR6_9CAUL
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:ESQ81392.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source
cn_combo_scaffold_644_22
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20454..21461
DNA (1008bp) protein (336aa)
cytochrome d oxidase cyd, subunit II (EC:1.10.3.-)
Ubiquinol oxidase subunit II, cyanide insensitive n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4NZQ5_9CAUL
Ubiquinol oxidase subunit II, cyanide insensitive {ECO:0000313|EMBL:ESQ81391.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.
cn_combo_scaffold_644_23
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21461..21601
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P804_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81390.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
cn_combo_scaffold_644_24
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21715..24045
DNA (2331bp) protein (777aa)
dme; NAD-dependent malic enzyme (EC:1.1.1.39)
Malic enzyme n=10 Tax=Brucella abortus RepID=C9UM33_BRUAO
Malic enzyme {ECO:0000313|EMBL:EEX82473.1}; TaxID=520451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 3 str. Tulya.;"
cn_combo_scaffold_644_25
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24171..25088)
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3H5_OCHA4
Transcriptional regulator LysR {ECO:0000313|EMBL:GAN67792.1}; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobact
bacterial regulatory helix-turn-helix , lysR family protein
cn_combo_scaffold_644_26
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25544..27124
DNA (1581bp) protein (527aa)
major facilitator transporter n=1 Tax=Ochrobactrum anthropi RepID=UPI0002890359
Major facilitator transporter {ECO:0000313|EMBL:EXL01772.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.
major Facilitator Superfamily protein
cn_combo_scaffold_644_27
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27121..28113
DNA (993bp) protein (331aa)
LysR family transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J165_POLGS
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC64439.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
LysR family transcriptional regulator
cn_combo_scaffold_644_28
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28064..28285)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F4S1_KETVY
hypothetical protein
Uncharacterized conserved small protein-like protein {ECO:0000313|EMBL:AEM42492.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonici
cn_combo_scaffold_644_29
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28287..29501)
DNA (1215bp) protein (405aa)
conjugal transfer protein TraI n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FC5B
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KFC64441.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;
conjugation TrbI-like protein
cn_combo_scaffold_644_30
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29498..30478)
DNA (981bp) protein (327aa)
P-type conjugative transfer protein TrbG n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQL6_BREDI
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KFC64442.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;
P-type conjugative transfer protein TrbG
Displaying items 1-30 of 89 in total

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