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cn_combo_scaffold_539

Alias: PEL42_40

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Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_539_1
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43..369
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Gluconobacter frateurii RepID=UPI00029A80E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EBA13243.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CC
cn_combo_scaffold_539_2
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

369..2636
DNA (2268bp) protein (756aa)
UvrD/REP helicase N-terminal domain protein n=1 Tax=Burkholderia pseudomallei NCTC 13179 RepID=U5V1G7_BURPE
uvrD/REP helicase N-terminal domain protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAM90986.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
cn_combo_scaffold_539_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3772..4959)
DNA (1188bp) protein (396aa)
Phage integrase family protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVB1_AZOBR
Tyrosine site-specific integrase/recombinase protein {ECO:0000313|EMBL:CDN95788.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
phage integrase family protein
cn_combo_scaffold_539_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5605..6768
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KRP6_RHISN
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACP22754.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
cn_combo_scaffold_539_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6771..7736
DNA (966bp) protein (322aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KRP7_RHISN
sugar phosphate isomerase/epimerase rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ACP22755.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobi
cn_combo_scaffold_539_6
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7835..8824)
DNA (990bp) protein (330aa)
PREDICTED: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15FD3
Putative dehydrogenase {ECO:0000313|EMBL:EJN06009.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium
Rhizopine catabolism protein mocA
cn_combo_scaffold_539_7
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8835..9842)
DNA (1008bp) protein (336aa)
Putative dehydrogenase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VIZ6_9RHIZ
Putative dehydrogenase {ECO:0000313|EMBL:EJN06012.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" sourc
putative dehydrogenase-related protein
cn_combo_scaffold_539_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9963..11024)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037AA47A
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
regulatory protein LacI
cn_combo_scaffold_539_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11169..12134
DNA (966bp) protein (322aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium gallicum RepID=UPI00036E9817
sugar ABC transporter rbh
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ93636.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
cn_combo_scaffold_539_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12266..13270
DNA (1005bp) protein (335aa)
ABC transporter permease n=1 Tax=Rhizobium gallicum RepID=UPI00035C2FB5
sugar ABC transporter rbh
ABC transporter permease {ECO:0000313|EMBL:KEA08174.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sou
cn_combo_scaffold_539_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..13760
DNA (483bp) protein (161aa)
ABC transport protein, ATP-binding protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A499_RHIET
ABC transport protein, ATP-binding protein {ECO:0000313|EMBL:EGE60686.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
sugar ABC transporter ATP-binding protein
cn_combo_scaffold_539_12
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13720..14115
DNA (396bp) protein (132aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003695689
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEC79789.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
sugar ABC transporter ATP-binding protein
cn_combo_scaffold_539_13
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14159..14722)
DNA (564bp) protein (188aa)
Transcriptional regulator n=1 Tax=Saccharomonospora glauca K62 RepID=I1D3N8_9PSEU
Transcriptional regulator {ECO:0000313|EMBL:EIE99562.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K6
TetR family transcriptional regulator
cn_combo_scaffold_539_14
unknown

Not on your lists

14957..15322
DNA (366bp) protein (122aa)

This feature has no annotations

cn_combo_scaffold_539_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15309..15689
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PJ49_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX11416.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
ketosteroid isomerase-like protein
cn_combo_scaffold_539_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15740..16753
DNA (1014bp) protein (338aa)
Esterase/lipase-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1S3_STRRD
esterase/lipase-like protein rbh
Esterase/lipase-like protein {ECO:0000313|EMBL:ACZ87375.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium ro
cn_combo_scaffold_539_17
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16766..17800)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Pantoea sp. A4 RepID=UPI0003819F8A
LacI family transcriptional regulator {ECO:0000313|EMBL:KGJ10036.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paraco
LacI family transcriptional regulator rbh
cn_combo_scaffold_539_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17910..18842
DNA (933bp) protein (311aa)
Myo-inosose-2 dehydratase (EC:4.2.1.44) rbh
Inosose dehydratase n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2MIA6_9ENTR
Endonuclease {ECO:0000313|EMBL:KGJ10035.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacill
cn_combo_scaffold_539_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18850..20028
DNA (1179bp) protein (393aa)
oxidoreductase n=1 Tax=Pantoea sp. A4 RepID=UPI00036981C0
Oxidoreductase {ECO:0000313|EMBL:KGJ10034.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobaci
oxidoreductase domain-containing protein rbh
cn_combo_scaffold_539_20
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20025..21047
DNA (1023bp) protein (341aa)
Inositol 2-dehydrogenase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5V4_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KGJ10033.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus
hypothetical protein rbh
cn_combo_scaffold_539_21
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21040..21834
DNA (795bp) protein (265aa)
UPI0003CE7E11 related cluster n=1 Tax=unknown RepID=UPI0003CE7E11
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ10032.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutu
short-chain dehydrogenase
cn_combo_scaffold_539_22
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21886..22797
DNA (912bp) protein (304aa)
sugar ABC transporter periplasmic sugar-binding protein (EC:3.6.3.17)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sagittula stellata E-37 RepID=A3KAM4_9RHOB
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EBA05788.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagitt
cn_combo_scaffold_539_23
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22885..24015
DNA (1131bp) protein (377aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCJ3_RHILT
ABC transporter permease {ECO:0000313|EMBL:KGJ10030.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus
inner-membrane translocator
cn_combo_scaffold_539_24
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24017..24805
DNA (789bp) protein (263aa)
ABC transporter-like protein (EC:3.6.3.17)
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase n=1 Tax=Sagittula stellata E-37 RepID=A3KAM6_9RHOB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ10029.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracocc
cn_combo_scaffold_539_25
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25375..26220
DNA (846bp) protein (282aa)
Universal stress protein uspA n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXD1_POLGS
Uncharacterized protein {ECO:0000313|EMBL:EXL07923.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium deflu
Universal stress protein uspA
cn_combo_scaffold_539_26
Hyphomonas neptunium, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26245..27843
DNA (1599bp) protein (533aa)
Na/Pi cotransporter family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C0Z0_HYPNA
Na/Pi cotransporter family protein
Na/Pi cotransporter family protein {ECO:0000313|EMBL:ABI76115.1}; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomona
cn_combo_scaffold_539_27
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27946..29811)
DNA (1866bp) protein (622aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C4R8_9RHIZ
Capsular biosynthesis protein {ECO:0000313|EMBL:KKC34566.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophil
epimerase
cn_combo_scaffold_539_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29811..30779)
DNA (969bp) protein (323aa)
Glycosyl transferase, family 4 n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X0A1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKB08908.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Glycosyl transferase, family 4
cn_combo_scaffold_539_29
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31021..32052)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z07_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68996.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
cn_combo_scaffold_539_30
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32061..33191)
DNA (1131bp) protein (377aa)
wbiB; NAD-dependent epimerase/dehydratase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEK60645.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEK60645.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxal
NAD-dependent epimerase/dehydratase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI62_COLFT
Displaying items 1-30 of 251 in total

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