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cn_combo_scaffold_825

Alias: PEL42_43

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_825_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..366)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT35_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB86201.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
cn_combo_scaffold_825_2
unknown

Not on your lists

comp(320..532)
DNA (213bp) protein (71aa)

This feature has no annotations

cn_combo_scaffold_825_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(507..1460)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEY8_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KKB86200.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
cn_combo_scaffold_825_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1801..2148)
DNA (348bp) protein (116aa)
sulfurtransferase n=1 Tax=Loktanella vestfoldensis RepID=UPI00037BC2AE
Sulfurtransferase {ECO:0000313|EMBL:KKB86199.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
rhodanese domain-containing protein
cn_combo_scaffold_825_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2351..2695)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK41_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFL29739.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_825_6
unknown

Not on your lists

comp(2803..2916)
DNA (114bp) protein (38aa)

This feature has no annotations

cn_combo_scaffold_825_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2916..3920)
DNA (1005bp) protein (335aa)
Cytochrome d ubiquinol oxidase subunit II n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A9R0_RHIRD
Ubiquinol oxidase subunit II {ECO:0000313|EMBL:KFL29747.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;
cytochrome bd ubiquinol oxidase subunit II
cn_combo_scaffold_825_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3910..5334)
DNA (1425bp) protein (475aa)
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-)
cytochrome D ubiquinol oxidase subunit I n=1 Tax=Rhizobium mongolense RepID=UPI0003B47952
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:KKB86197.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
cn_combo_scaffold_825_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5355..5981)
DNA (627bp) protein (209aa)
peroxidase (EC:1.11.1.7)
Probable antioxidant protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZI7_9RHOB
Peroxidase {ECO:0000313|EMBL:KKB86196.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
cn_combo_scaffold_825_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6100..8262)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T5U7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL29744.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_825_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..9331)
DNA (1062bp) protein (354aa)
cytochrome C n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B564B4
Cytochrome C {ECO:0000313|EMBL:KKB86219.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative cytochrome c (fragment)
cn_combo_scaffold_825_12
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9324..10565)
DNA (1242bp) protein (414aa)
cytochrome C n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B35F0E
Uncharacterized protein {ECO:0000313|EMBL:KDP95706.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
hypothetical protein
cn_combo_scaffold_825_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10562..11191)
DNA (630bp) protein (210aa)
cytochrome C oxidase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6D9B1
Cytochrome C oxidase {ECO:0000313|EMBL:KFL29742.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cytochrome C oxidase, mono-heme subunit
cn_combo_scaffold_825_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11188..12795)
DNA (1608bp) protein (536aa)
ccoN; cytochrome-c oxidase (EC:1.9.3.1)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B618BA
Membrane protein {ECO:0000313|EMBL:KKB86193.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
cn_combo_scaffold_825_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12987..14246)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Q8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86192.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
cn_combo_scaffold_825_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14236..14670)
DNA (435bp) protein (145aa)
Thioredoxin n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G26_MESSB
Thioredoxin {ECO:0000313|EMBL:KKB86191.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
thioredoxin
cn_combo_scaffold_825_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14682..16433)
DNA (1752bp) protein (584aa)
Sulfate transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF92_PELHB
Sulfate:proton symporter {ECO:0000313|EMBL:KKB86190.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.
sulfate transporter
cn_combo_scaffold_825_18
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16486..16812)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF91_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29739.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_825_19
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16854..17747)
DNA (894bp) protein (298aa)
Beta-lactamase n=1 Tax=Nitratireductor indicus C115 RepID=K2NTA1_9RHIZ
Beta-lactamase {ECO:0000313|EMBL:KKB86217.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
cn_combo_scaffold_825_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17769..18209)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F59882
Permease {ECO:0000313|EMBL:KFL29737.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_825_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18209..18637)
DNA (429bp) protein (143aa)
Putative transmembrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF90_PELHB
Membrane protein {ECO:0000313|EMBL:KKB86187.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative transmembrane protein
cn_combo_scaffold_825_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18634..18855)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Pseudovibrio RepID=G8PIP9_PSEUV
Uncharacterized protein {ECO:0000313|EMBL:KFL29736.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_825_23
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18932..19237
DNA (306bp) protein (102aa)
Putative transcriptional regulatory protein, Ars family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RT56_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFL29735.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Ars family transcriptional regulator
cn_combo_scaffold_825_24
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19237..19707
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE39_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86184.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
putative protein-S-isoprenylcysteine methyltransferase
cn_combo_scaffold_825_25
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19791..20474
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9L5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86183.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
cn_combo_scaffold_825_26
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20507..21310)
DNA (804bp) protein (268aa)
Redoxin domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A880_STAND
Uncharacterized protein {ECO:0000313|EMBL:KKB86182.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
redoxin
cn_combo_scaffold_825_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21307..23079)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS35_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KKB86216.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
cytochrome c biogenesis protein transmembrane region
cn_combo_scaffold_825_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23137..24480)
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devo
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X405_OCHA4
integral membrane sensor signal transduction histidine kinase
cn_combo_scaffold_825_29
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24480..25139)
DNA (660bp) protein (220aa)
Transcriptional regulatory protein qseB n=1 Tax=Rhizobium sp. RepID=L0NIX8_RHISP
Transcriptional regulator {ECO:0000313|EMBL:KFL29730.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative two-component response regulator protein
cn_combo_scaffold_825_30
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25246..25887
DNA (642bp) protein (214aa)
DSBA oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRW2_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:KFL29729.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DSBA oxidoreductase
Displaying items 1-30 of 58 in total

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