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cn_combo_scaffold_837

Alias: PEL42_45

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_837_1
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..121
DNA (120bp) protein (40aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AKI01628.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AKI01628.1};; EC=1.2.1.20 {ECO:0000313|EMBL:AKI01628.1};; EC=1.2.1.79 {ECO:0000313|EMBL:AKI01628.1};;
gabD5; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate semialdehyde dehydrogenase n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QIP9_9RHIZ
cn_combo_scaffold_837_2
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203..1177)
DNA (975bp) protein (325aa)
Putative transketolase, alpha subunit n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QFM9_9RHIZ
putative transketolase, alpha subunit rbh
Putative transketolase, alpha subunit {ECO:0000313|EMBL:CDI12310.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
cn_combo_scaffold_837_3
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1374..1898
DNA (525bp) protein (175aa)
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
cn_combo_scaffold_837_4
unknown

Not on your lists

1905..1997
DNA (93bp) protein (31aa)

This feature has no annotations

cn_combo_scaffold_837_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2469..2903)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RZ39_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD87216.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
helix-turn-helix domain-containing protein
cn_combo_scaffold_837_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2913..4901)
DNA (1989bp) protein (663aa)
Conjugal transfer coupling protein TraG n=1 Tax=Nitratireductor indicus C115 RepID=K2MYM0_9RHIZ
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:EKF40363.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source=
conjugal transfer coupling protein TraG
cn_combo_scaffold_837_7
bacterium YEK0313, Bacteria

Not on your lists

comp(4926..6677)
DNA (1752bp) protein (584aa)
type VI secretion protein n=1 Tax=Afipia birgiae RepID=UPI0002F016C2
Uncharacterized protein {ECO:0000313|EMBL:CEJ16030.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
cn_combo_scaffold_837_8
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6985..7779)
DNA (795bp) protein (265aa)
lytic transglycosylase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003600246
Soluble lytic murein transglycosylase and related regulatory proteins {ECO:0000313|EMBL:GAD58170.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
lytic transglycosylase, catalytic
cn_combo_scaffold_837_9
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7784..8119)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B265_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KFI25455.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodoba
hypothetical protein
cn_combo_scaffold_837_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8116..8700)
DNA (585bp) protein (195aa)
Conjugation peptidase TraF. Serine peptidase. MEROPS family S26C n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BL3_MESSB
TraF peptidase
Conjugation peptidase TraF. Serine peptidase. MEROPS family S26C {ECO:0000313|EMBL:ABG65212.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phy
cn_combo_scaffold_837_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8697..9200)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BL5_MESSB
Uncharacterized protein {ECO:0000313|EMBL:EZQ17750.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
cn_combo_scaffold_837_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9197..10279)
DNA (1083bp) protein (361aa)
Replication initiator protein A n=2 Tax=Afipia RepID=D6V0Y6_9BRAD
Replication initiator protein A {ECO:0000313|EMBL:EFI53366.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
replication protein A
cn_combo_scaffold_837_13
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10291..10572)
DNA (282bp) protein (94aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BL7_MESSB
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABG65208.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelati
cn_combo_scaffold_837_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10711..11211)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D3936
Uncharacterized protein {ECO:0000313|EMBL:ETR77846.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
cn_combo_scaffold_837_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..11485)
DNA (252bp) protein (84aa)
UPI0003CE8209 related cluster n=1 Tax=unknown RepID=UPI0003CE8209
Uncharacterized protein {ECO:0000313|EMBL:ETR77847.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
cn_combo_scaffold_837_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11603..11824)
DNA (222bp) protein (74aa)
UPI0003D05580 related cluster n=2 Tax=unknown RepID=UPI0003D05580
Uncharacterized protein {ECO:0000313|EMBL:ETR77848.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
cn_combo_scaffold_837_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12570..13760)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9U4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05216.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
cn_combo_scaffold_837_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14132..14446)
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JHL5_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KJF71768.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_837_19
unknown

Not on your lists

14493..15272
DNA (780bp) protein (260aa)

This feature has no annotations

cn_combo_scaffold_837_20
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15395..15838)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2QK30_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB98213.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
cn_combo_scaffold_837_21
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15828..16691)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003730A6E
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:CDN57032.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
cn_combo_scaffold_837_22
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16722..17399)
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMI8_9RHOB
Transcriptional regulator, GntR family protein {ECO:0000313|EMBL:EDM72324.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sou
gntR; regulatory protein
cn_combo_scaffold_837_23
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17547..18560
DNA (1014bp) protein (338aa)
3,4-dihydroxyphenylacetate 2,3-dioxygenase protein (EC:1.13.11.15)
3,4-dihydroxyphenylacetate 2,3-dioxygenase protein {ECO:0000313|EMBL:AJC82700.1}; EC=1.13.11.15 {ECO:0000313|EMBL:AJC82700.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ITT5_9BRAD
cn_combo_scaffold_837_24
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18557..19216
DNA (660bp) protein (220aa)
Carboxylesterase n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KGF9_9RHOB
hypothetical protein
Carboxylesterase {ECO:0000313|EMBL:EKX59692.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
cn_combo_scaffold_837_25
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19218..20036
DNA (819bp) protein (273aa)
atsC; ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP binding protein) {ECO:0000313|EMBL:CAL79176.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAL79176.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
Putative ABC transporter (ATP binding protein) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ50_BRASO
cn_combo_scaffold_837_26
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20033..20845
DNA (813bp) protein (271aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T519_9BRAD
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:CCE01546.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
putative ABC transporter permease protein
cn_combo_scaffold_837_27
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20842..21600
DNA (759bp) protein (253aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ52_BRASO
ABC transporter permease
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:CAL79178.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
cn_combo_scaffold_837_28
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21622..22539
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E8ED0E
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ABC transporter substrate-binding protein
cn_combo_scaffold_837_29
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22595..23140
DNA (546bp) protein (182aa)
Putative flavoprotein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LGI7_9BURK
chrR; chromate reductase Tax=GWA2_Curvibacter_64_110_curated
chrR; chromate reductase
cn_combo_scaffold_837_30
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23146..24042
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJB7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11810.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
transcription factor transcription regulator protein
Displaying items 1-30 of 62 in total

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