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cn_combo_scaffold_801

Alias: PEL42_46

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Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_801_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134..439)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32615.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cn_combo_scaffold_801_2
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436..1134)
DNA (699bp) protein (233aa)
cobyrinic acid ac-diamide synthase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000344CF72
parA; probable plasmid partitioning protein
Probable plasmid partitioning protein {ECO:0000313|EMBL:CAZ15893.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xant
cn_combo_scaffold_801_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1342..1641
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC68181.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
cn_combo_scaffold_801_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1794..2822
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V231_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFL32617.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
integrase family protein
cn_combo_scaffold_801_5
unknown

Not on your lists

3034..3168
DNA (135bp) protein (45aa)

This feature has no annotations

cn_combo_scaffold_801_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3173..3556
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32618.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cn_combo_scaffold_801_7
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4044..5690
DNA (1647bp) protein (549aa)
resolvase domain-containing protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB98B
Site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:CCG08246.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodos
cn_combo_scaffold_801_trna_1
unknown

Not on your lists

comp(5664..5737)
DNA (74bp)
transferRNA
cn_combo_scaffold_801_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6008..6610
DNA (603bp) protein (201aa)
tag; DNA-3-methyladenine glycosylase 1 (EC:3.2.2.20)
Dna-3-methyladenine glycosylase 1 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CRF6_9RHOB
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:KFL32620.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavin
cn_combo_scaffold_801_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6699..7130)
DNA (432bp) protein (144aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000372DBC0
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB08013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
cn_combo_scaffold_801_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7127..7675)
DNA (549bp) protein (183aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2QES3_9RHIZ
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB08013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
ABC-type nitrate/sulfonate/bicarbonate transportsystems periplasmic components-like protein
cn_combo_scaffold_801_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7698..8807)
DNA (1110bp) protein (370aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=alpha proteobacterium BAL199 RepID=A8TU04_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKB08014.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
nitrate/sulfonate ABC transporter permease
cn_combo_scaffold_801_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8804..9670)
DNA (867bp) protein (289aa)
Nitrate ABC transporter transmembrane protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8U7_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KKB08015.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
cn_combo_scaffold_801_13
unknown

Not on your lists

comp(9667..9810)
DNA (144bp) protein (48aa)

This feature has no annotations

cn_combo_scaffold_801_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9810..10607)
DNA (798bp) protein (266aa)
UPI0003D0272C related cluster n=1 Tax=unknown RepID=UPI0003D0272C
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB08016.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
cn_combo_scaffold_801_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10812..12263)
DNA (1452bp) protein (484aa)
D-hydantoinase/dihydropyrimidinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV46_9RHIZ
Dihydropyrimidinase {ECO:0000313|EMBL:KKB08017.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dihydropyrimidinase
cn_combo_scaffold_801_16
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12334..13584)
DNA (1251bp) protein (417aa)
amaB-1; N-carbamoyl-L-amino acid hydrolase 1 (EC:3.5.1.87)
Putative N-carbamyl-L-cysteine amidohydrolase, putative atcC n=1 Tax=Rhizobium sp. RepID=L0NGM8_RHISP
Allantoate amidohydrolase {ECO:0000313|EMBL:KKB77835.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
cn_combo_scaffold_801_17
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13744..15240)
DNA (1497bp) protein (499aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7H1_PELHB
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KKB77834.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
methylmalonate-semialdehyde dehydrogenase
cn_combo_scaffold_801_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15304..16740)
DNA (1437bp) protein (479aa)
Omega amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:KKB08020.1}; EC=2.6.1.18 {ECO:0000313|EMBL:KKB08020.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Omega-amino acid--pyruvate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7H2_PELHB
omega-amino acid--pyruvate aminotransferase rbh
cn_combo_scaffold_801_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16756..17481
DNA (726bp) protein (242aa)
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7H3_PELHB
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB08021.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
transcriptional regulator RutR of pyrimidine catabolism (TetR family)
cn_combo_scaffold_801_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17606..18235
DNA (630bp) protein (210aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P3_PELHB
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
outer membrane lipoprotein carrier protein LolA
cn_combo_scaffold_801_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18232..19044)
DNA (813bp) protein (271aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
bacA1; Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQV9_RHIRD
cn_combo_scaffold_801_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19155..19835
DNA (681bp) protein (227aa)
Glutathione S-transferase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R993_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07971.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glutathione S-transferase family protein
cn_combo_scaffold_801_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19816..21063
DNA (1248bp) protein (416aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=429727 species
Iron-sulfur cluster-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R994_PELHB
(Fe-S)-binding protein
cn_combo_scaffold_801_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21063..21935
DNA (873bp) protein (291aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R995_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08357.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
nucleoside-diphosphate-sugar epimerase
cn_combo_scaffold_801_25
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21932..22582
DNA (651bp) protein (217aa)
N-acetyltransferase GCN5 n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3I0I4_9RHIZ
GCN5 family acetyltransferase {ECO:0000313|EMBL:KFL30303.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
acetyltransferase
cn_combo_scaffold_801_26
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22579..23085
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADC8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:KFL30302.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_801_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23100..23864)
DNA (765bp) protein (255aa)
2-hydroxymuconic semialdehyde hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08358.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
2-hydroxymuconic semialdehyde hydrolase
cn_combo_scaffold_801_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24043..24567
DNA (525bp) protein (175aa)
Translation initiation factor IF-3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP6_PELHB
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ch
translation initiation factor 3
cn_combo_scaffold_801_29
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24698..25246)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIJ2_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:GAJ96637.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
Displaying items 1-30 of 117 in total

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