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cn_combo_scaffold_1096

Alias: PEL42_54

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1096_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..121
DNA (120bp) protein (40aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=GATB_AZOC5
glutamyl-tRNA(Gln) amidotransferase subunit B
cn_combo_scaffold_1096_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172..1059)
DNA (888bp) protein (296aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB78091.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
permease of the drug/metabolite transporter (DMT) superfamily
cn_combo_scaffold_1096_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1303..1893)
DNA (591bp) protein (197aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA7_PELHB
phosphoribosylglycinamide formyltransferase
cn_combo_scaffold_1096_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1890..2966)
DNA (1077bp) protein (359aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA6_PELHB
phosphoribosylformylglycinamidine cyclo-ligase
cn_combo_scaffold_1096_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3100..4191
DNA (1092bp) protein (364aa)
Putative permease often clustered with de novo purine synthesis n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34753.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative permease often clustered with de novo purine synthesis
cn_combo_scaffold_1096_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4169..4921
DNA (753bp) protein (251aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA4_PELHB
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KFC72423.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="D
chromosome replication initiator DnaA
cn_combo_scaffold_1096_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4914..7085
DNA (2172bp) protein (724aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA3_PELHB
polyphosphate kinase rbh
cn_combo_scaffold_1096_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7082..8617
DNA (1536bp) protein (512aa)
Exopolyphosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34756.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
exopolyphosphatase
cn_combo_scaffold_1096_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8754..9923)
DNA (1170bp) protein (390aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1121477 species="Bacteria; Proteobacteria; Alp
Ribonuclease D n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA1_PELHB
ribonuclease D
cn_combo_scaffold_1096_10
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10107..11897
DNA (1791bp) protein (597aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:KFC72419.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KFC72419.1};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
aspartyl-tRNA synthetase n=1 Tax=Martelella mediterranea RepID=UPI0003803E75
aspartyl-tRNA synthetase
cn_combo_scaffold_1096_11
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12076..13116)
DNA (1041bp) protein (347aa)
Tax=CG_Delta_06
cn_combo_scaffold_1096_12
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13113..13637)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959B49
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ABR90853.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium s
cn_combo_scaffold_1096_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13759..15360
DNA (1602bp) protein (534aa)
EAL domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB99_PELHB
EAL domain protein {ECO:0000313|EMBL:KFC72418.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
diguanylate phosphodiesterase
cn_combo_scaffold_1096_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15577..17859
DNA (2283bp) protein (761aa)
Malic enzyme {ECO:0000313|EMBL:KKB10323.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KKB10323.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;"
NADP-dependent malic enzyme n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB98_PELHB
NADP-dependent malic enzyme
cn_combo_scaffold_1096_15
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17972..18370
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Y7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34761.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
cn_combo_scaffold_1096_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18486..19505
DNA (1020bp) protein (340aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Y8_PELHB
pyruvate dehydrogenase E1 component alpha subunit
cn_combo_scaffold_1096_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19595..20971
DNA (1377bp) protein (459aa)
Pyruvate dehydrogenase {ECO:0000313|EMBL:KFL32446.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KFL32446.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Dev
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Y9_PELHB
pyruvate dehydrogenase E1 component beta subunit
cn_combo_scaffold_1096_18
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20983..22302
DNA (1320bp) protein (440aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteob
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z0_PELHB
dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
cn_combo_scaffold_1096_19
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22313..22963
DNA (651bp) protein (217aa)
Lipolytic protein G-D-S-L n=1 Tax=Nitratireductor indicus C115 RepID=K2PRJ3_9RHIZ
Arylesterase {ECO:0000313|EMBL:KFL32444.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
arylesterase
cn_combo_scaffold_1096_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22988..24427
DNA (1440bp) protein (480aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobia
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z2_PELHB
dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex rbh
cn_combo_scaffold_1096_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24613..25566
DNA (954bp) protein (318aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z4_PELHB
lipoate synthase
cn_combo_scaffold_1096_22
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25566..26009
DNA (444bp) protein (148aa)
Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z5_PELHB
Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG {ECO:0000313|EMBL:KFC72404.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobia
putative oligoketide cyclase/dehydratase or lipid transport protein YfjG
cn_combo_scaffold_1096_23
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26080..26586)
DNA (507bp) protein (169aa)
Single-stranded DNA-binding protein n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PH47_PSEUV
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=728005 species="Bacteria; Proteobacteria; Alph
ssDNA-binding protein
cn_combo_scaffold_1096_24
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26855..28357
DNA (1503bp) protein (501aa)
Acetyl-CoA hydrolase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YWK0_9RHIZ
Acetyl-CoA hydrolase {ECO:0000313|EMBL:KGE02353.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
Acetyl-CoA hydrolase
cn_combo_scaffold_1096_25
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28493..29284
DNA (792bp) protein (264aa)
Segregation and condensation protein A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9T7_PELHB
Segregation and condensation protein A {ECO:0000313|EMBL:KFC69985.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
segregation and condensation protein A
cn_combo_scaffold_1096_26
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29281..29922
DNA (642bp) protein (214aa)
Segregation and condensation protein B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9U3_PELHB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
Segregation and condensation protein B
cn_combo_scaffold_1096_27
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30086..30292
DNA (207bp) protein (69aa)
Sec-independent protein translocase protein TatA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9U2_PELHB
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sour
twin-arginine translocation protein TatA
cn_combo_scaffold_1096_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30334..31044
DNA (711bp) protein (237aa)
Sec-independent protein translocase protein TatB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9U1_PELHB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
Twin-arginine translocation protein TatB
cn_combo_scaffold_1096_29
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31047..31874
DNA (828bp) protein (276aa)
Sec-independent protein translocase protein TatC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9U0_PELHB
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sou
Twin-arginine translocation protein TatC
cn_combo_scaffold_1096_30
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32006..33337
DNA (1332bp) protein (444aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9T6_PELHB
seryl-tRNA synthetase rbh
Displaying items 1-30 of 42 in total

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