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cn_combo_scaffold_1158

Alias: PEL42_55

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1158_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
integrase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035EB3CF
Integrase family protein {ECO:0000313|EMBL:EMS99178.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; A
Integrase family protein
cn_combo_scaffold_1158_trna_1
unknown

Not on your lists

comp(674..744)
DNA (71bp)
transferRNA
cn_combo_scaffold_1158_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..1909)
DNA (1107bp) protein (369aa)
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:KKB08148.1}; EC=3.5.4.13 {ECO:0000313|EMBL:KKB08148.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hy
Deoxycytidine triphosphate deaminase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T6_PELHB
deoxycytidine triphosphate deaminase
cn_combo_scaffold_1158_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2188..3402
DNA (1215bp) protein (405aa)
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T5_PELHB
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:KKB08392.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinha
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase
cn_combo_scaffold_1158_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3405..4391
DNA (987bp) protein (329aa)
Arginine-binding periplasmic protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9I9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08149.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
arginine-binding periplasmic protein
cn_combo_scaffold_1158_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4493..4906)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08150.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5051..6697
DNA (1647bp) protein (549aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=361041 species="Bacteria; Proteobac
Lysine--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J1_PELHB
lysyl-tRNA synthetase
cn_combo_scaffold_1158_7
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6752..6985
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A8S7_THEAQ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
protein of unknown function
cn_combo_scaffold_1158_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7056..7532)
DNA (477bp) protein (159aa)
Aminoglycoside N(6')-acetyltransferase type 1 {ECO:0000256|PIRNR:PIRNR000452}; EC=2.3.1.82 {ECO:0000256|PIRNR:PIRNR000452};; Aminoglycoside resistance protein {ECO:0000256|PIRNR:PIRNR000452}; TaxID=46
GNAT family acetyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPX3_9SPHN
N-acetyltransferase GCN5
cn_combo_scaffold_1158_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7499..8146)
DNA (648bp) protein (216aa)
Phage repressor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J3_PELHB
DNA-binding protein {ECO:0000313|EMBL:KKB08152.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage repressor
cn_combo_scaffold_1158_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8272..8631
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31031.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_1158_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8628..9734
DNA (1107bp) protein (369aa)
Dihydroorotate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J5_PELHB
Diguanylate cyclase {ECO:0000313|EMBL:KKB85064.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
dihydroorotate dehydrogenase rbh
cn_combo_scaffold_1158_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9717..11063)
DNA (1347bp) protein (449aa)
DNA-damage-inducible protein F n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08154.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DNA-damage-inducible protein F
cn_combo_scaffold_1158_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11275..11946)
DNA (672bp) protein (224aa)
Pantothenate kinase {ECO:0000313|EMBL:KFC68092.1}; EC=2.7.1.33 {ECO:0000313|EMBL:KFC68092.1};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Dev
fructose transporter n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI000370523D
pantothenate kinase
cn_combo_scaffold_1158_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11946..12236)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZJL3_METPB
Uncharacterized protein {ECO:0000313|EMBL:KKB08155.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12385..14871
DNA (2487bp) protein (829aa)
Helicase domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J9_PELHB
Helicase {ECO:0000313|EMBL:KKB08156.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
helicase domain-containing protein
cn_combo_scaffold_1158_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14954..15661
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08396.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15935..16696)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08157.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16693..17619)
DNA (927bp) protein (309aa)
Membrane protein, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K2_PELHB
Permease {ECO:0000313|EMBL:KKB08397.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17748..21224)
DNA (3477bp) protein (1159aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08158.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
peptidoglycan binding domain-containing protein
cn_combo_scaffold_1158_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21402..22073
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K6_PELHB
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKB08159.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
LuxR family transcriptional regulator
cn_combo_scaffold_1158_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22076..22474
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SNV8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKB08160.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase
cn_combo_scaffold_1158_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22600..24147)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFP9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08161.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24152..25090)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08162.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25122..26348)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ1_PELHB
Cell surface protein {ECO:0000313|EMBL:KKB08163.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1158_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26561..27040
DNA (480bp) protein (160aa)
Carbon monoxide oxidation accessory protein CoxG-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08164.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
carbon monoxide oxidation accessory protein CoxG-like protein
cn_combo_scaffold_1158_26
unknown

Not on your lists

27135..27257
DNA (123bp) protein (41aa)

This feature has no annotations

cn_combo_scaffold_1158_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27437..28438
DNA (1002bp) protein (334aa)
Putative nucleoside ABC transporter, substrate-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ3_PELHB
Membrane protein {ECO:0000313|EMBL:KKB08165.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative nucleoside ABC transporter substrate-binding protein rbh
cn_combo_scaffold_1158_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28463..30130
DNA (1668bp) protein (556aa)
Putative nucleoside ABC transporter, ATP-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ4_PELHB
Predicted nucleoside ABC transporter, ATP-binding component {ECO:0000313|EMBL:CDP50606.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
putative nucleoside ABC transporter ATP-binding component
cn_combo_scaffold_1158_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30130..31218
DNA (1089bp) protein (363aa)
Putative nucleoside ABC transporter, permease 1 component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ5_PELHB
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB08166.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatens
putative nucleoside ABC transporter, permease 1 component rbh
Displaying items 1-30 of 51 in total

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