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cn_combo_scaffold_1249

Alias: PEL42_56

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1249_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..503)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E0196
Endoribonuclease, L-PSP family protein {ECO:0000313|EMBL:EYR79417.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
hypothetical protein
cn_combo_scaffold_1249_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(567..944)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F26_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63999.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
cn_combo_scaffold_1249_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1004..2557)
DNA (1554bp) protein (518aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F25_MESSB
extracellular solute-binding protein rbh
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABG64000.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; C
cn_combo_scaffold_1249_4
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2590..3576)
DNA (987bp) protein (329aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F24_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKC38128.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
oligopeptide/dipeptide ABC transporter ATPase rbh
cn_combo_scaffold_1249_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3573..4544)
DNA (972bp) protein (324aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F13_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKC38127.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
oligopeptide/dipeptide ABC transporter ATPase rbh
cn_combo_scaffold_1249_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4537..5403)
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F23_MESSB
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG64002.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
cn_combo_scaffold_1249_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5406..6362)
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F22_MESSB
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG64003.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
cn_combo_scaffold_1249_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6620..7852)
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F21_MESSB
major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABG64004.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelat
cn_combo_scaffold_1249_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7875..9458)
DNA (1584bp) protein (528aa)
Phenylalanine/histidine ammonia-lyase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F20_MESSB
phenylalanine/histidine ammonia-lyase rbh
Phenylalanine/histidine ammonia-lyase {ECO:0000313|EMBL:ABG64005.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chel
cn_combo_scaffold_1249_10
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9488..10729)
DNA (1242bp) protein (414aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XTN6_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KKB81645.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
transcriptional regulator, LysR family
cn_combo_scaffold_1249_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11010..11402
DNA (393bp) protein (131aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000369A1BA
glyoxalase/bleomycin resistance protein/dioxygenase
cn_combo_scaffold_1249_12
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11443..13107)
DNA (1665bp) protein (555aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49) rbh
Urocanate hydratase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F10_MESSB
cn_combo_scaffold_1249_13
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13145..14233)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZYK3_RHILW
Uncharacterized protein {ECO:0000313|EMBL:KKC38123.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
cn_combo_scaffold_1249_14
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14233..15507)
DNA (1275bp) protein (425aa)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F08_MESSB
Allantoate amidohydrolase {ECO:0000313|EMBL:KKC38122.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihiru
allantoate amidohydrolase rbh
cn_combo_scaffold_1249_15
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15504..16859)
DNA (1356bp) protein (452aa)
Amidohydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F07_MESSB
Allantoinase {ECO:0000313|EMBL:KKC38121.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
amidohydrolase rbh
cn_combo_scaffold_1249_16
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17051..18031)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D631E
Quinone oxidoreductase {ECO:0000313|EMBL:KKB81651.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
alcohol dehydrogenase
cn_combo_scaffold_1249_17
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18190..20565)
DNA (2376bp) protein (792aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyp
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUB1_TISMK
aceE; pyruvate dehydrogenase rbh
cn_combo_scaffold_1249_18
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20752..21153
DNA (402bp) protein (134aa)
Transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUB2_TISMK
AsnC family transcriptional regulator {ECO:0000313|EMBL:KKC35400.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ep
transcriptional regulator
cn_combo_scaffold_1249_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21320..22375)
DNA (1056bp) protein (352aa)
LacI family transcriptional regulator n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FTK0_RHIML
LacI family transcriptional regulator {ECO:0000313|EMBL:EHK79538.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor
LacI family transcriptional regulator
cn_combo_scaffold_1249_20
unknown

Not on your lists

22547..23824
DNA (1278bp) protein (426aa)

This feature has no annotations

cn_combo_scaffold_1249_21
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

Not on your lists

23888..25285
DNA (1398bp) protein (466aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1L8_HALOH
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
family 1 extracellular solute-binding protein
cn_combo_scaffold_1249_22
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25340..26251
DNA (912bp) protein (304aa)
Permease component of ABC-type sugar transporter n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VQ84_9RHIZ
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJN02260.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
binding--dependent transport system inner membrane component family protein
cn_combo_scaffold_1249_23
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26248..27105
DNA (858bp) protein (286aa)
ABC transporter, permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AF44_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EAR26245.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
binding-protein-dependent transporters inner membrane component
cn_combo_scaffold_1249_24
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27121..28185
DNA (1065bp) protein (355aa)
ABC transporter n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DRM8_9RHIZ
ATPase component of ABC-type sugar transporter
ABC transporter {ECO:0000313|EMBL:EJT05861.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
cn_combo_scaffold_1249_25
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28400..28888
DNA (489bp) protein (163aa)
Membrane protein {ECO:0000313|EMBL:KJR63273.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilu
Putative uncharacterized protein id=2721999 bin=GWF1_Rhodobacteraceae_65_7 species=Pelagibacterium halotolerans genus=Pelagibacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
cn_combo_scaffold_1249_26
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29037..30524
DNA (1488bp) protein (496aa)
Alkaline phosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDA6_PELHB
Alkaline phosphatase {ECO:0000313|EMBL:KGB80602.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;
alkaline phosphatase
cn_combo_scaffold_1249_27
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30604..31038
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDA5_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ50731.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
cn_combo_scaffold_1249_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31039..31716
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000372E265
ABC transporter {ECO:0000313|EMBL:KFL32365.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter-like protein
cn_combo_scaffold_1249_29
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31713..32906
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003666D4E
Uncharacterized protein {ECO:0000313|EMBL:KFL32366.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_1249_30
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(32949..33983)
DNA (1035bp) protein (345aa)
Transcriptional regulator, AraC family n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5UIV1_9PLAN
transcriptional activator, AraC type Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
transcriptional activator, AraC type
Displaying items 1-30 of 37 in total

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