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cn_combo_scaffold_1418

Alias: PEL42_63

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1418_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2535)
DNA (2535bp) protein (845aa)
Sensory box histidine kinase/response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE93_PELHB
Histidine kinase {ECO:0000313|EMBL:KKB09900.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sensory box histidine kinase/response regulator
cn_combo_scaffold_1418_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2662..3753)
DNA (1092bp) protein (364aa)
Flagellar biosynthesis protein FlhB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE94_PELHB
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KKB09528.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
flagellar biosynthesis protein FlhB
cn_combo_scaffold_1418_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3757..4524)
DNA (768bp) protein (256aa)
Flagellar biosynthetic protein fliR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE95_PELHB
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
flagellar biosynthesis protein FliR
cn_combo_scaffold_1418_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4526..4792)
DNA (267bp) protein (89aa)
Flagellar biosynthesis protein FliQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE96_PELHB
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:KKB09530.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
flagellar biosynthesis protein FliQ
cn_combo_scaffold_1418_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4902..5231)
DNA (330bp) protein (110aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE97_PELHB
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hypho
flagellar hook-basal body complex protein FliE
cn_combo_scaffold_1418_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..5657)
DNA (411bp) protein (137aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE98_PELHB
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia c
flagellar basal body rod protein FlgC
cn_combo_scaffold_1418_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5670..6074)
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE99_PELHB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia c
flagellar basal-body rod protein FlgB
cn_combo_scaffold_1418_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6304..6963
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09533.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1418_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6926..7717
DNA (792bp) protein (264aa)
Flagellar biosynthesis protein FliP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA1_PELHB
Flagellar biosynthesis protein flip {ECO:0000313|EMBL:KKB10320.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
flagellar biosynthesis protein FliP
cn_combo_scaffold_1418_10
unknown

Not on your lists

7779..7994
DNA (216bp) protein (72aa)

This feature has no annotations

cn_combo_scaffold_1418_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7922..11194)
DNA (3273bp) protein (1091aa)
Tetratricopeptide repeat domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09901.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1418_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11414..12391)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10381.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1418_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12388..12819)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFC69143.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
cn_combo_scaffold_1418_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12819..14006)
DNA (1188bp) protein (396aa)
Flagellar motor switch protein FliM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA7_PELHB
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
flagellar motor switch protein FliM
cn_combo_scaffold_1418_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14006..14503)
DNA (498bp) protein (166aa)
Flagellar biosynthesis protein FliL n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09903.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar biosynthesis protein FliL
cn_combo_scaffold_1418_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14786..15526
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10382.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar basal body rod protein FlgF
cn_combo_scaffold_1418_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15545..16330
DNA (786bp) protein (262aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB0_PELHB
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KKB09904.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
flagellar basal-body rod protein FlgG
cn_combo_scaffold_1418_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16342..17289
DNA (948bp) protein (316aa)
Flagellar basal-body P-ring formation protein FlgA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09905.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar basal body P-ring biosynthesis protein FlgA
cn_combo_scaffold_1418_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17305..18042
DNA (738bp) protein (246aa)
Flagellar L-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB2_PELHB
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteob
flagellar L-ring protein FlgH
cn_combo_scaffold_1418_20
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18265..18444
DNA (180bp) protein (60aa)
Contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89766.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
cn_combo_scaffold_1418_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18496..19992
DNA (1497bp) protein (499aa)
Carboxypeptidase Taq n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKC1_9RHIZ
Peptidase M32 {ECO:0000313|EMBL:KKB09907.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Zn-dependent carboxypeptidase
cn_combo_scaffold_1418_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20165..20599
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCK8_PELHB
Curlin {ECO:0000313|EMBL:KFL28431.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_1418_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20657..21037
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LDM2_AGRSH
Uncharacterized protein {ECO:0000313|EMBL:KKB09909.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1418_24
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21214..21627
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JV2_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKB79898.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cn_combo_scaffold_1418_25
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21786..22208
DNA (423bp) protein (141aa)
DGPFAETKE family protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TES2_BURPP
Dehydrogenase {ECO:0000313|EMBL:KKB85382.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
DGPFAETKE family protein
cn_combo_scaffold_1418_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22313..22678)
DNA (366bp) protein (122aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB6_PELHB
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sour
C4-type zinc finger protein, DksA/TraR family
cn_combo_scaffold_1418_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22880..23314)
DNA (435bp) protein (145aa)
Flagellar trans-acting factor FliX n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10383.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar trans-acting factor FliX
cn_combo_scaffold_1418_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23513..24670
DNA (1158bp) protein (386aa)
Flagellar P-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER1_PELHB
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteob
flagellar P-ring protein FlgI
cn_combo_scaffold_1418_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24670..24993
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09913.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_1418_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24990..25457
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10385.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy