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cn_combo_scaffold_2313

Alias: PEL42_77

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2313_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..712
DNA (711bp) protein (237aa)
30S ribosomal protein S1 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9C6_PELHB
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
30S ribosomal protein S1
cn_combo_scaffold_2313_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(878..1102)
DNA (225bp) protein (75aa)
Transcriptional regulator n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YWY4_9RHIZ
Uncharacterized HTH-type transcriptional regulator y4dJ {ECO:0000313|EMBL:CDX22718.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizob
XRE family transcriptional regulator
cn_combo_scaffold_2313_3
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1262..1597
DNA (336bp) protein (112aa)
UPI0003CEF52F related cluster n=1 Tax=unknown RepID=UPI0003CEF52F
Uncharacterized protein {ECO:0000313|EMBL:ESY61283.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_2313_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1697..2203
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9D4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30359.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-acetyltransferase GCN5
cn_combo_scaffold_2313_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2343..2624
DNA (282bp) protein (94aa)
Integration host factor subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9D6_PELHB
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=728005 species="Bacteria; Proteobacteria
Integration host factor beta subunit
cn_combo_scaffold_2313_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2676..3041
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9D8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07884.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_2313_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3098..3748
DNA (651bp) protein (217aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9D9_PELHB
phosphoribosylanthranilate isomerase
cn_combo_scaffold_2313_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3881..5110
DNA (1230bp) protein (410aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
Tryptophan synthase beta chain n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9E0_PELHB
tryptophan synthase subunit beta
cn_combo_scaffold_2313_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5107..5931
DNA (825bp) protein (275aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=429727 species="B
Tryptophan synthase alpha chain n=2 Tax=Pseudovibrio RepID=G8PJE7_PSEUV
tryptophan synthase subunit alpha
cn_combo_scaffold_2313_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6041..7021
DNA (981bp) protein (327aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9E8_PELHB
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
acetyl-CoA carboxyl transferase subunit beta
cn_combo_scaffold_2313_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7073..7765
DNA (693bp) protein (231aa)
Nucleotidyltransferase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07889.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
nucleotidyltransferase family protein
cn_combo_scaffold_2313_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7762..10779
DNA (3018bp) protein (1006aa)
ATP-dependent nuclease subunit B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07890.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ATP-dependent nuclease subunit B rbh
cn_combo_scaffold_2313_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10776..14207
DNA (3432bp) protein (1144aa)
ATP-dependent nuclease subunit A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07891.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ATP-dependent nuclease subunit A
cn_combo_scaffold_2313_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14368..14691
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F1_PELHB
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
thioredoxin protein
cn_combo_scaffold_2313_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14903..16600
DNA (1698bp) protein (566aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrob
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AEG7_9BACT
beta-hexosaminidase
cn_combo_scaffold_2313_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16645..17952
DNA (1308bp) protein (436aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570,
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ83_9RHIZ
cn_combo_scaffold_2313_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18155..18412
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07895.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_2313_18
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18421..18660)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB78716.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
cn_combo_scaffold_2313_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18745..19560)
DNA (816bp) protein (272aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8I5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08335.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
cn_combo_scaffold_2313_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19571..20011)
DNA (441bp) protein (147aa)
Ferric uptake regulation protein FUR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8I4_PELHB
Fur family transcriptional regulator {ECO:0000313|EMBL:KFL30333.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribof
ferric uptake regulation protein FUR
cn_combo_scaffold_2313_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20041..20520)
DNA (480bp) protein (160aa)
Ribosomal-protein-S18p-alanine acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8I3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07897.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ribosomal-protein-S18p-alanine acetyltransferase
cn_combo_scaffold_2313_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20517..21131)
DNA (615bp) protein (205aa)
Inactive-like protein of metal-dependent proteases, putative molecular chaperone n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8I2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30335.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
inactive-like protein of metal-dependent proteases molecular chaperone
cn_combo_scaffold_2313_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21328..22944
DNA (1617bp) protein (539aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=429727 species=
Apolipoprotein N-acyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA56_PELHB
Apolipoprotein N-acyltransferase / copper homeostasis protein CutE
cn_combo_scaffold_2313_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..23454
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N8E1_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB02977.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
cn_combo_scaffold_2313_trna_1
unknown

Not on your lists

comp(23512..23593)
DNA (82bp)
transferRNA
cn_combo_scaffold_2313_25
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23641..24003)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8M2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30343.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_2313_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24150..25148
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R992_PELHB
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KKB07899.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
NAD-dependent epimerase/dehydratase
cn_combo_scaffold_2313_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25314..26027
DNA (714bp) protein (238aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXE4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08337.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
PadR family transcriptional regulator
cn_combo_scaffold_2313_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26133..26819)
DNA (687bp) protein (229aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07900.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
tetR; transcriptional regulator
cn_combo_scaffold_2313_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27150..28301
DNA (1152bp) protein (384aa)
Glycosyl hydrolase family 109 protein; Flags: Precursor (EC:3.2.1.-)
Plasmid pSfHH103e complete sequence n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFQ3_RHIFH
Oxidoreductase {ECO:0000313|EMBL:KKB07902.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Displaying items 1-30 of 49 in total

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