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cn_combo_scaffold_2513

Alias: PEL42_82

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2513_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000381E98B
Transposase {ECO:0000313|EMBL:KKB77398.1}; Flags: Fragment;; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
transposase IS4 family protein
cn_combo_scaffold_2513_2

Not on your lists

479..769
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA18974.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cn_combo_scaffold_2513_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(700..1293)
DNA (594bp) protein (198aa)
Transposase IS4 family protein n=2 Tax=Methylobacterium RepID=B1Z9J1_METPB
Transposase {ECO:0000313|EMBL:KKB77398.1}; Flags: Fragment;; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
transposase IS4 family protein
cn_combo_scaffold_2513_4
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1515..2486)
DNA (972bp) protein (324aa)
Glycerate dehydrogenase {ECO:0000313|EMBL:KFG67581.1}; EC=1.1.1.29 {ECO:0000313|EMBL:KFG67581.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae
hprA; glycerate dehydrogenase (EC:1.1.1.29)
D-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UDI7_ADVKW
cn_combo_scaffold_2513_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2514..3449)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B713D2
Uncharacterized protein {ECO:0000313|EMBL:EWY38660.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
LysR family transcriptional regulator
cn_combo_scaffold_2513_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3487..4377)
DNA (891bp) protein (297aa)
citrate (pro-3S)-lyase (EC:4.1.3.6)
citryl-CoA lyase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B36501
Uncharacterized protein {ECO:0000313|EMBL:KJB96645.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
cn_combo_scaffold_2513_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4370..5566)
DNA (1197bp) protein (399aa)
formyl-CoA transferase (EC:2.8.3.16) rbh
Formyl-CoA transferase {ECO:0000313|EMBL:ADH91550.1}; EC=2.8.3.16 {ECO:0000313|EMBL:ADH91550.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; S
acyl-CoA transferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6B514
cn_combo_scaffold_2513_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5578..6690)
DNA (1113bp) protein (371aa)
5-exo-alcohol dehydrogenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B69512
5-exo-alcohol dehydrogenase {ECO:0000313|EMBL:EWY38657.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella
alcohol dehydrogenase zinc-binding domain-containing protein rbh
cn_combo_scaffold_2513_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6707..7981)
DNA (1275bp) protein (425aa)
membrane protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B71A86
Membrane protein {ECO:0000313|EMBL:EWY38656.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresi
TRAP dicarboxylate transporter subunit DctM rbh
cn_combo_scaffold_2513_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7978..8496)
DNA (519bp) protein (173aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B493E2
Uncharacterized protein {ECO:0000313|EMBL:EWY38655.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
inner membrane protein
cn_combo_scaffold_2513_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8486..9496)
DNA (1011bp) protein (337aa)
transporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3EF46
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ADH91546.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Star
cn_combo_scaffold_2513_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9531..10970)
DNA (1440bp) protein (480aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ADH91545.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ADH91545.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobactera
aldehyde dehydrogenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2F58C
cn_combo_scaffold_2513_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11579..12199
DNA (621bp) protein (207aa)
ATP-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00038190E2
transposase IS21
Putative IS21 family transposase IstB protein {ECO:0000313|EMBL:ENN84854.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
cn_combo_scaffold_2513_14
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12549..13169
DNA (621bp) protein (207aa)
Transposase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P059_9RHOB
Transposase {ECO:0000313|EMBL:EAV41467.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC
integrase catalytic subunit
cn_combo_scaffold_2513_15
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13266..13682)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037CEF7A
Uncharacterized protein {ECO:0000313|EMBL:EIG57406.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
cn_combo_scaffold_2513_16
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13737..14303)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031AB6F9
hypothetical protein
Blr8069 protein {ECO:0000313|EMBL:BAC53334.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
cn_combo_scaffold_2513_17
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14905..15912)
DNA (1008bp) protein (336aa)
sodium:calcium antiporter n=1 Tax=Wenxinia marina RepID=UPI000362C692
Sodium:calcium antiporter {ECO:0000313|EMBL:KDP94760.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
K+-dependent Na+/Ca+ exchanger related-protein
cn_combo_scaffold_2513_18
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15909..16583)
DNA (675bp) protein (225aa)
carbonic anhydrase n=1 Tax=Cytophaga aurantiaca RepID=UPI00035CC7F4
Carbonic anhydrase {ECO:0000313|EMBL:KDP94758.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EA
carbonic anhydrase
cn_combo_scaffold_2513_19
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16599..18287)
DNA (1689bp) protein (563aa)
Low affinity sulfate transporter n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7WEN0_NONDD
Sulfate permease {ECO:0000313|EMBL:KDP94759.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA
low affinity sulfate transporter rbh
cn_combo_scaffold_2513_20
unknown

Not on your lists

comp(18284..18877)
DNA (594bp) protein (198aa)

This feature has no annotations

cn_combo_scaffold_2513_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18862..19446)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DG81_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU76500.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
secreted protein of unknown function
cn_combo_scaffold_2513_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19571..20461
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGV9_AZOL4
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBS90557.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="
cn_combo_scaffold_2513_23
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20640..21485
DNA (846bp) protein (282aa)
Putative UspA stress protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7W3_9BRAD
Universal stress protein UspA {ECO:0000313|EMBL:KKC25945.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
putative UspA stress protein
cn_combo_scaffold_2513_24
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21497..22003)
DNA (507bp) protein (169aa)
Short chain dehydrogenase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X143_9SPHN
DNA polymerase III subunit epsilon
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AKH18722.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
cn_combo_scaffold_2513_25
unknown

Not on your lists

comp(23152..23262)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 25 items

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