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cn_combo_scaffold_2965

Alias: PEL42_89

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2965_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..501
DNA (501bp) protein (167aa)
UvrABC system protein B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R666_PELHB
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
cn_combo_scaffold_2965_2

Not on your lists

823..1833
DNA (1011bp) protein (337aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM18149.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cn_combo_scaffold_2965_3
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1919..2473)
DNA (555bp) protein (185aa)
UPI0003CDDEFD related cluster n=1 Tax=unknown RepID=UPI0003CDDEFD
Succinoglycan biosynthesis protein exoI {ECO:0000313|EMBL:ESY59974.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="M
excalibur domain-containing protein
cn_combo_scaffold_2965_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2852..3067
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFL25755.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
cn_combo_scaffold_2965_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3554..3895
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07221.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_2965_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3964..4332
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07222.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cn_combo_scaffold_2965_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4348..5370)
DNA (1023bp) protein (341aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA4_PELHB
ferrochelatase
cn_combo_scaffold_2965_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..7066)
DNA (1593bp) protein (531aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA5_PELHB
Putative membrane protein {ECO:0000313|EMBL:KFC63823.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
cn_combo_scaffold_2965_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7073..7972)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA6_PELHB
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB07223.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
LysR family transcriptional regulator
cn_combo_scaffold_2965_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8118..8540
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07224.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_2965_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8696..9172
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R671_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB80133.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cn_combo_scaffold_2965_12
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9207..9647)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC37232.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
cn_combo_scaffold_2965_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9770..10438
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TU34_9BRAD
General stress protein {ECO:0000313|EMBL:KKB86825.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
cn_combo_scaffold_2965_14
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10472..11395)
DNA (924bp) protein (308aa)
Membrane protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LMK9_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KKB85576.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
cn_combo_scaffold_2965_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11469..11777)
DNA (309bp) protein (103aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R675_PELHB
DNA methyltransferase {ECO:0000313|EMBL:KFL31935.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_2965_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11924..12736
DNA (813bp) protein (271aa)
FolM Alternative dihydrofolate reductase 1 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R676_PELHB
Short-chain dehydrogenase {ECO:0000313|EMBL:KKB07225.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
FolM Alternative dihydrofolate reductase 1 rbh
cn_combo_scaffold_2965_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12733..14589
DNA (1857bp) protein (619aa)
UvrABC system protein C n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R677_PELHB
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C
cn_combo_scaffold_2965_18
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14686..15039
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037017D8
Uncharacterized protein {ECO:0000313|EMBL:KKB80139.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cn_combo_scaffold_2965_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15074..15640
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAA6_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE98992.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
cn_combo_scaffold_2965_20
unknown

Not on your lists

comp(15649..16248)
DNA (600bp) protein (200aa)

This feature has no annotations

cn_combo_scaffold_2965_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16380..17384
DNA (1005bp) protein (335aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0V158_RHILV
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31940.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
ABC transporter ATP-binding protein
cn_combo_scaffold_2965_22
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17381..18175
DNA (795bp) protein (265aa)
ABC transporter permease n=1 Tax=Rhizobium RepID=UPI00037C5484
ABC transporter permease {ECO:0000313|EMBL:KKB80142.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cn_combo_scaffold_2965_23
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18178..18978
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5Q5S4_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KKB80143.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
transmembrane component of ABC transporter
cn_combo_scaffold_2965_24
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19210..20283
DNA (1074bp) protein (358aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXR1_9BRAD
cn_combo_scaffold_2965_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20370..20936
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R678_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07229.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
cn_combo_scaffold_2965_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20933..21184
DNA (252bp) protein (84aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Methylosinus sp. LW4 RepID=UPI000377E44B
Molybdenum cofactor biosynthesis protein MoaD {ECO:0000313|EMBL:KKB07230.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
molybdopterin converting factor subunit 1
cn_combo_scaffold_2965_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21230..21679
DNA (450bp) protein (150aa)
Molybdenum cofactor biosynthesis protein MoaE, molybdopterin converting factor subunit 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R680_PELHB
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:KKB07231.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
molybdenum cofactor biosynthesis protein MoaE, molybdopterin converting factor subunit 2
cn_combo_scaffold_2965_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21750..22640)
DNA (891bp) protein (297aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KFL31949.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KFL31949.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; H
Branched-chain amino acid aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R681_PELHB
branched-chain amino acid aminotransferase
cn_combo_scaffold_2965_29
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22775..23299
DNA (525bp) protein (175aa)
HTH-type transcriptional regulator PetP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R682_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08194.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
HTH-type transcriptional regulator PetP
cn_combo_scaffold_2965_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23312..24133)
DNA (822bp) protein (274aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R686_PELHB
pyrroline-5-carboxylate reductase rbh
Displaying items 1-30 of 42 in total

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