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cn_combo_scaffold_6134

Alias: PEL42_101

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6134_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
30S ribosomal protein S4 n=1 Tax=Woodsholea maritima RepID=UPI0003792F56
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;
30S ribosomal protein S4
cn_combo_scaffold_6134_2
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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487..1296
DNA (810bp) protein (270aa)
Caax amino protease family protein, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDH6_PELHB
caax amino protease family protein
Caax amino protease family protein, putative {ECO:0000313|EMBL:AEQ51777.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" sou
cn_combo_scaffold_6134_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1293..2531)
DNA (1239bp) protein (413aa)
Permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QJM0_9RHIZ
MFS transporter {ECO:0000313|EMBL:KFL30898.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
major facilitator superfamily protein
cn_combo_scaffold_6134_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2589..2906)
DNA (318bp) protein (106aa)
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB
RNA methyltransferase {ECO:0000313|EMBL:KKB10375.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
tRNA:Cm32/Um32 methyltransferase
cn_combo_scaffold_6134_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2906..3376)
DNA (471bp) protein (157aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB
tRNA:Cm32/Um32 methyltransferase
cn_combo_scaffold_6134_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3434..4030)
DNA (597bp) protein (199aa)
Putative acetyltransferase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6E2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB09868.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative acetyltransferase
cn_combo_scaffold_6134_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4200..4772)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000365A3DA
Uncharacterized protein {ECO:0000313|EMBL:KKB10376.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
N-acetyltransferase
cn_combo_scaffold_6134_8
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4856..5293
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE83_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35485.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
cn_combo_scaffold_6134_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5290..5625
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE85_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09869.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_6134_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5853..6929
DNA (1077bp) protein (359aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomi
Isocitrate dehydrogenase [NADP] n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE88_PELHB
isocitrate dehydrogenase
cn_combo_scaffold_6134_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7005..8678)
DNA (1674bp) protein (558aa)
von Willebrand factor type A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXP4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30904.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
cn_combo_scaffold_6134_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8906..9907
DNA (1002bp) protein (334aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTS2_9RHIZ
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KFL30905.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ri
hypothetical protein
cn_combo_scaffold_6134_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9980..10864
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE89_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09871.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
cn_combo_scaffold_6134_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10968..13649)
DNA (2682bp) protein (894aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T8A0_9BRAD
alanyl-tRNA synthetase
cn_combo_scaffold_6134_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14066..15100)
DNA (1035bp) protein (345aa)
Protein RecA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE92_PELHB
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=46914 species="Bacteria; Proteobact
recombinase A
cn_combo_scaffold_6134_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15418..15516
DNA (99bp) protein (33aa)
GguC protein {ECO:0000313|EMBL:KFL30909.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Displaying 16 items

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