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cn_combo_scaffold_6850

Alias: PEL42_103

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6850_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(44..205)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA93_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05033.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
cn_combo_scaffold_6850_2
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(513..1148)
DNA (636bp) protein (212aa)
UPI0003CECF10 related cluster n=1 Tax=unknown RepID=UPI0003CECF10
Uncharacterized protein {ECO:0000313|EMBL:ESY90225.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_6850_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1206..2642)
DNA (1437bp) protein (479aa)
Probably methylase/helicase n=2 Tax=Oligotropha carboxidovorans RepID=B6JA98_OLICO
Methylase {ECO:0000313|EMBL:KIC55709.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
methylase/helicase
cn_combo_scaffold_6850_4
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2644..3012)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA4_OLICO
Single-stranded DNA endonuclease {ECO:0000313|EMBL:KIC55704.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
hypothetical protein
cn_combo_scaffold_6850_5
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3009..3968)
DNA (960bp) protein (320aa)
Antirestriction protein ArdC n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA5_OLICO
Antirepressor {ECO:0000313|EMBL:KIC55738.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
antirestriction protein
cn_combo_scaffold_6850_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4200..6110
DNA (1911bp) protein (637aa)
Putative signal transduction protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YY18_SPHJU
putative signal transduction protein
Putative signal transduction protein {ECO:0000313|EMBL:BAI95250.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
cn_combo_scaffold_6850_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6125..6742)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4G8_9RHIZ
PilZ domain-containing protein {ECO:0000313|EMBL:EYR79795.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
PilT domain-containing protein
cn_combo_scaffold_6850_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6693..7139)
DNA (447bp) protein (149aa)
excisionase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F732
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD46299.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
cn_combo_scaffold_6850_9
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7211..8581)
DNA (1371bp) protein (457aa)
Integrase n=2 Tax=Oligotropha carboxidovorans RepID=B6JAP7_OLICO
integrase rbh
Integrase {ECO:0000313|EMBL:KIC53726.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
Displaying 9 items

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