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cn_combo_scaffold_737

Alias: PSE51_378

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_737_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..495
DNA (495bp) protein (165aa)
SsrA-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD5_PSEUX
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="
cn_combo_scaffold_737_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

492..1409
DNA (918bp) protein (306aa)
Amidohydrolase 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD6_PSEUX
amidohydrolase rbh
Amidohydrolase 2 {ECO:0000313|EMBL:AEA23435.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
cn_combo_scaffold_737_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2007..3347
DNA (1341bp) protein (447aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD7_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA23436.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_737_4
unknown

Not on your lists

3509..3817
DNA (309bp) protein (103aa)

This feature has no annotations

cn_combo_scaffold_737_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3715..4134)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003649FFB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25381.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_737_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4131..5804)
DNA (1674bp) protein (558aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD8_PSEUX
xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:AEA23437.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_737_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5801..6478)
DNA (678bp) protein (226aa)
Isochorismatase hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVD9_PSEUX
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AEA23438.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_737_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6475..7197)
DNA (723bp) protein (241aa)
Isochorismatase hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE0_PSEUX
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AEA23439.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_737_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7194..8534)
DNA (1341bp) protein (447aa)
allophanate hydrolase (EC:3.5.1.54) rbh
Allophanate hydrolase {ECO:0000313|EMBL:AEA23440.1}; EC=3.5.1.54 {ECO:0000313|EMBL:AEA23440.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;
Allophanate hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE1_PSEUX
cn_combo_scaffold_737_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8730..9419)
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE2_PSEUX
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEA23441.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_737_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9496..10218)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23442.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_737_12
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10337..11812
DNA (1476bp) protein (492aa)
deoxyribodipyrimidine photolyase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF3CE
Deoxyribodipyrimidine photolyase-like protein {ECO:0000313|EMBL:CDQ44904.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium n
deoxyribodipyrimidine photolyase-like protein
cn_combo_scaffold_737_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11871..12365
DNA (495bp) protein (165aa)
DoxX family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE5_PSEUX
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEA23444.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_737_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12367..13122
DNA (756bp) protein (252aa)
Protein-disulfide isomerase-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE6_PSEUX
protein-disulfide isomerase-like protein rbh
Protein-disulfide isomerase-like protein {ECO:0000313|EMBL:AEA23445.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
cn_combo_scaffold_737_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13174..15219)
DNA (2046bp) protein (682aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVE7_PSEUX
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AEA23446.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
cn_combo_scaffold_737_trna_1
unknown

Not on your lists

15225..15297
DNA (73bp)
transferRNA
cn_combo_scaffold_737_16
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16007..16789)
DNA (783bp) protein (261aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GT71_9ACTO
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:GAB06796.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae
oxidoreductase
cn_combo_scaffold_737_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16786..17685)
DNA (900bp) protein (300aa)
Alpha/beta hydrolase fold protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AP88_DELSC
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
alpha/beta hydrolase fold protein
cn_combo_scaffold_737_18
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17795..18826)
DNA (1032bp) protein (344aa)
Uncharacterized protein {ECO:0000313|EMBL:KGA09984.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
alcohol dehydrogenase zinc-binding domain protein id=14624585 bin=bin5_DeltaP species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
alcohol dehydrogenase
cn_combo_scaffold_737_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18819..19649)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037AA6EE
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:EFH88039.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source
6-phosphogluconate dehydrogenase
cn_combo_scaffold_737_20
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19654..20160)
DNA (507bp) protein (169aa)
bile-acid 7-alpha-dehydratase n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003682324
Uncharacterized protein {ECO:0000313|EMBL:AEK41381.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
cn_combo_scaffold_737_21
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20280..20972
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003801851
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW12426.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
cn_combo_scaffold_737_22
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20969..21556)
DNA (588bp) protein (196aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
ferredoxin reductase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE72
Ferredoxin reductase {ECO:0000313|EMBL:EFE71502.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
cn_combo_scaffold_737_23
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21744..22184)
DNA (441bp) protein (147aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
Ferredoxin reductase n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D6A2R4_9ACTO
Ferredoxin reductase {ECO:0000313|EMBL:EFE71502.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
cn_combo_scaffold_737_24
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22196..23434)
DNA (1239bp) protein (413aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z6F8_9GAMM
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:EAW40503.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
acyl-CoA dehydrogenase
cn_combo_scaffold_737_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23431..24492)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI0003471373
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACY96842.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora cu
cn_combo_scaffold_737_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24485..26437)
DNA (1953bp) protein (651aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F3H2_SPHCR
enoyl-CoA hydratase Tax=GWA2_Rokubacteria_73_35_curated
enoyl-CoA hydratase/isomerase
cn_combo_scaffold_737_27
unknown

Not on your lists

comp(26754..26969)
DNA (216bp) protein (72aa)

This feature has no annotations

cn_combo_scaffold_737_28
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27096..28091)
DNA (996bp) protein (332aa)
Helix-turn-helix domain protein n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T3L8_MYCVP
helix-turn-helix domain-containing protein rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABM11768.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (
cn_combo_scaffold_737_29
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28189..28788
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T3L7_MYCVP
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABM11767.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaa
Displaying items 1-30 of 71 in total

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