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cn_combo_scaffold_820

Alias: PSE51_379

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_820_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24366.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_820_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

542..1000
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY8_PSEUX
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEA24367.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
cn_combo_scaffold_820_trna_1
unknown

Not on your lists

1030..1101
DNA (72bp)
transferRNA
cn_combo_scaffold_820_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1880..2500
DNA (621bp) protein (207aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG8_PSEUX
type IV secretory pathway VirD4 protein-like protein
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA26542.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
cn_combo_scaffold_820_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2497..2865
DNA (369bp) protein (123aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK90_PSEUX
type IV secretory pathway VirD4 protein-like protein
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA22313.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
cn_combo_scaffold_820_5
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2932..4164
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036B0851
Putative cytochrome P450 {ECO:0000313|EMBL:GAF47600.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605
cytochrome P450
cn_combo_scaffold_820_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4161..5024
DNA (864bp) protein (288aa)
Polysaccharide deacetylase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MWK7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98004.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
cn_combo_scaffold_820_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5007..5720)
DNA (714bp) protein (238aa)
isochorismatase hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Isochorismatase hydrolase id=1951581 bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
isochorismatase family protein
cn_combo_scaffold_820_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5782..6525
DNA (744bp) protein (248aa)
fabG; short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000382B872
3-oxoacyl-ACP reductase
cn_combo_scaffold_820_9
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6557..7576
DNA (1020bp) protein (340aa)
luciferase-like protein (EC:1.14.14.5)
alkanesulfonate monooxygenase n=1 Tax=Salisaeta longa RepID=UPI0003B69E53
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:KDA05998.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
cn_combo_scaffold_820_10
unknown

Not on your lists

7730..8842
DNA (1113bp) protein (371aa)

This feature has no annotations

cn_combo_scaffold_820_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8859..9707
DNA (849bp) protein (283aa)
NitT family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4U0_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFH81520.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobact
cn_combo_scaffold_820_12
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9697..10509
DNA (813bp) protein (271aa)
Sulfonate/nitrate/taurine ABC transporter permease n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I4B9_9PSEU
Sulfonate/nitrate/taurine ABC transporter permease {ECO:0000313|EMBL:EOD65324.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amyco
nitrate/sulfonate/bicarbonate ABC transporter permease protein
cn_combo_scaffold_820_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10509..11270
DNA (762bp) protein (254aa)
Amino acid ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIN1_AGRRK
amino acid ABC transporter
ABC transporter permease {ECO:0000313|EMBL:KEA03092.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sou
cn_combo_scaffold_820_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11267..12274
DNA (1008bp) protein (336aa)
phtD; 4,5-dihydroxyphthalate decarboxylase PhtD (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
phtD; 4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KXR9_BORA1
cn_combo_scaffold_820_15
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12271..13515
DNA (1245bp) protein (415aa)
Family III CoA-transferase subunit n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLQ2_9RHOB
Family III CoA-transferase subunit {ECO:0000313|EMBL:EAQ10829.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Mari
coaT; family III CoA-transferase subunit
cn_combo_scaffold_820_16
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13512..14804
DNA (1293bp) protein (431aa)
Putative subunit of succinyl-CoA:benzylsuccinate CoA-transferase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLQ1_9RHOB
Putative subunit of succinyl-CoA:benzylsuccinate CoA-transferase {ECO:0000313|EMBL:EAQ10828.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
acyl-CoA transferase
cn_combo_scaffold_820_17
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14826..15494)
DNA (669bp) protein (223aa)
Putative GntR family transcriptional regulator n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6X450_9ACTO
GntR family transcriptional regulator {ECO:0000313|EMBL:ETA05803.1}; TaxID=1423140 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans CGMCC 6
GntR family transcriptional regulator
cn_combo_scaffold_820_18
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15738..17072
DNA (1335bp) protein (445aa)
dioxygenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036204DC
putative phthalate 4,5-dioxygenase oxygenase subunit
Putative phthalate 4,5-dioxygenase oxygenase subunit {ECO:0000313|EMBL:BAM88157.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
cn_combo_scaffold_820_19
unknown

Not on your lists

17069..17383
DNA (315bp) protein (105aa)

This feature has no annotations

cn_combo_scaffold_820_20
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17380..18621
DNA (1242bp) protein (414aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4)
Formyl-CoA transferase n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4SHZ9_9MYCO
Formyl-CoA transferase {ECO:0000313|EMBL:EJO89425.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="
cn_combo_scaffold_820_21
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18618..19304
DNA (687bp) protein (229aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IH30_9SPHN
dimethylmenaquinone methyltransferase
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:CCA93874.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
cn_combo_scaffold_820_22
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19301..19990
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002F0C394
Uncharacterized protein {ECO:0000313|EMBL:KCZ96935.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
dimethylmenaquinone methyltransferase
cn_combo_scaffold_820_23
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19987..20628
DNA (642bp) protein (214aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Burkholderia sp. H160 RepID=B5WFI5_9BURK
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EEA02828.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
4-hydroxy-4-methyl-2-oxoglutarate aldolase
cn_combo_scaffold_820_24
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20628..21776
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RFN8_MYCXE
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EID09941.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacte
acd; acyl-CoA dehydrogenase rbh
cn_combo_scaffold_820_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21805..22572
DNA (768bp) protein (256aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00035CFC62
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADP80817.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
cn_combo_scaffold_820_26
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22569..23342
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J7R4_FRASU
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADP80818.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
cn_combo_scaffold_820_27
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23339..24490
DNA (1152bp) protein (384aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J7Q9_FRASU
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADP80813.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI
cn_combo_scaffold_820_28
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24483..25613
DNA (1131bp) protein (377aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABW13930.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABW13930.1};; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Fran
acetyl-CoA acetyltransferase n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003815319
cn_combo_scaffold_820_29
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25936..26148)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035C7EB6
putative iron-sulfur oxidoreductase
Putative iron-sulfur oxidoreductase {ECO:0000313|EMBL:BAL86038.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missourie
Displaying items 1-30 of 62 in total

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