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cn_combo_scaffold_3737

Alias: PSE51_385

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3737_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=675635 species="Bacteria; Actinobact
Transaldolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNB9_PSEUX
transaldolase
cn_combo_scaffold_3737_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

886..1554
DNA (669bp) protein (223aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC0_PSEUX
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEA27144.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_3737_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1669..2358)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27145.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3737_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2671..3342
DNA (672bp) protein (224aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC2_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA27146.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3737_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4138..4983
DNA (846bp) protein (282aa)
Transposase mutator type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L754_PSEUX
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AEA29027.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
cn_combo_scaffold_3737_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5005..5394
DNA (390bp) protein (130aa)
Transposase mutator type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L754_PSEUX
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AEA29027.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
cn_combo_scaffold_3737_7
unknown

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comp(5391..5648)
DNA (258bp) protein (86aa)

This feature has no annotations

cn_combo_scaffold_3737_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5688..6353
DNA (666bp) protein (222aa)
Regulatory protein TetR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J7L7_FRASU
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADP79626.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
cn_combo_scaffold_3737_9
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6918..7265
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BUJ4_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI03185.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain
cn_combo_scaffold_3737_10
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7601..8653)
DNA (1053bp) protein (351aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4)
carnitine dehydratase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627CFA
Carnitine dehydratase {ECO:0000313|EMBL:AKE87950.1}; TaxID=191292 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
cn_combo_scaffold_3737_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(8789..10501)
DNA (1713bp) protein (571aa)
Thiamine pyrophosphate enzyme-like TPP binding region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATS7_RUBXD
thiamine pyrophosphate enzyme-like TPP binding region
Thiamine pyrophosphate enzyme-like TPP binding region {ECO:0000313|EMBL:ABG05201.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae;
cn_combo_scaffold_3737_12
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10575..11357)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Saccharomonospora azurea RepID=H8G426_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHY91124.1}; Flags: Precursor;; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomo
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
cn_combo_scaffold_3737_13
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11345..11611)
DNA (267bp) protein (89aa)
dihydrodiol dehydrogenase n=1 Tax=Thermus igniterrae RepID=UPI000369312E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV16359.1}; TaxID=1111069 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
cn_combo_scaffold_3737_14
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11608..12165)
DNA (558bp) protein (186aa)
Putative naphthalene dioxygenase small subunit n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6X4B1_9ACTO
Putative naphthalene dioxygenase small subunit {ECO:0000313|EMBL:GAC00902.1}; TaxID=1208314 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis
3-phenylpropionate dioxygenase subunit beta
cn_combo_scaffold_3737_15
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12149..13534)
DNA (1386bp) protein (462aa)
Putative naphthalene dioxygenase large subunit n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6X953_9ACTO
Putative naphthalene dioxygenase large subunit {ECO:0000313|EMBL:GAC00903.1}; TaxID=1208314 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis
phthalate 3,4-dioxygenase, alpha subunit
cn_combo_scaffold_3737_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13594..15201)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HDD1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14311.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
cn_combo_scaffold_3737_17
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15198..16091)
DNA (894bp) protein (298aa)
isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23 4.1.3.-)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IR64_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14310.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
cn_combo_scaffold_3737_18
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16088..16876)
DNA (789bp) protein (263aa)
hydroxyquinol 1,2-dioxygenase (EC:1.13.11.1)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IXC5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14309.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
cn_combo_scaffold_3737_19
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16879..17928)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HQA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14308.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
zinc-binding dehydrogenase oxidoreductase
cn_combo_scaffold_3737_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17934..18206)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QGM9_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ETW99272.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
cn_combo_scaffold_3737_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18379..19551)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative exported protein id=3198517 bin=GWF2_Methylomirabilis_70_14 species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
cn_combo_scaffold_3737_22
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19548..21182)
DNA (1635bp) protein (545aa)
ferredoxin n=1 Tax=Rhodococcus sp. DK17 RepID=UPI00037F292A
Ferredoxin--NADP(+) reductase {ECO:0000313|EMBL:EME19824.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
ferredoxin reductase
cn_combo_scaffold_3737_23
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21341..22006
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AY78_FRADG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEH09508.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomer
Displaying 23 items

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