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cn_combo_scaffold_6351

Alias: PSE51_392

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6351_1
unknown

Not on your lists

2..85
DNA (84bp) protein (28aa)

This feature has no annotations

cn_combo_scaffold_6351_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(175..978)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY34_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24275.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6351_3
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(975..1547)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PE57_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY73522.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
cn_combo_scaffold_6351_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1710..2378
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFN3_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB74788.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
cn_combo_scaffold_6351_5
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(2365..4068)
DNA (1704bp) protein (568aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEG34497.1}; EC=1.1.99.3 {ECO:0000313|EMBL:AEG34497.1};; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae;
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DJA0_THETG
cn_combo_scaffold_6351_6
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4065..4487)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M7ALR0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EMP11699.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
cn_combo_scaffold_6351_7
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4484..5323)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036FF602
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:EUA58276.1}; TaxID=1299331 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avi
fumarylacetoacetate hydrolase
cn_combo_scaffold_6351_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5775..6944)
DNA (1170bp) protein (390aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC56_NAKMY
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:ACV81450.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella mul
cn_combo_scaffold_6351_9
unknown

Not on your lists

comp(6937..7119)
DNA (183bp) protein (61aa)

This feature has no annotations

cn_combo_scaffold_6351_10
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7112..7834)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QGF5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC67356.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
MOSC domain containing protein
cn_combo_scaffold_6351_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7822..8253)
DNA (432bp) protein (144aa)
Transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAL5_CATAD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU72514.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
cn_combo_scaffold_6351_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8378..9580
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY35_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA24276.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_6351_13
Smaragdicoccus niigatensis, Smaragdicoccus, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9682..10212
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000374D44F
cn_combo_scaffold_6351_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11003..12019
DNA (1017bp) protein (339aa)
Hydrolase CocE/NonD family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY36_PSEUX
hydrolase CocE/NonD family protein
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:AEA24277.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_6351_15
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12330..13553)
DNA (1224bp) protein (408aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCW10113.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CCW10113.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodoco
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000364F747
D-alanyl-D-alanine carboxypeptidase
cn_combo_scaffold_6351_16
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13706..14155
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003721ED3
Putative uncharacterized protein {ECO:0000313|EMBL:EDX20445.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
hypothetical protein
cn_combo_scaffold_6351_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14193..14480)
DNA (288bp) protein (96aa)
Dyp-type peroxidase family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY37_PSEUX
dyp-type peroxidase protein
Dyp-type peroxidase family {ECO:0000313|EMBL:AEA24278.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
cn_combo_scaffold_6351_18
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14507..15397
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UPB4_9MICO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB47572.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104
cn_combo_scaffold_6351_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15309..16283)
DNA (975bp) protein (325aa)
Probable DNA repair protein Psed_2054 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY38_PSEUX
DNA repair protein rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
cn_combo_scaffold_6351_20
unknown

Not on your lists

16403..16738
DNA (336bp) protein (112aa)

This feature has no annotations

cn_combo_scaffold_6351_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16735..17013
DNA (279bp) protein (93aa)
Transcriptional regulator, TetR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY44_PSEUX
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEA24285.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
Displaying 21 items

View Taxonomy