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cn_combo_scaffold_1103

Alias: PSE51_8

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1103_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1392)
DNA (1392bp) protein (464aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA24769.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA24769.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PTR5_9ACTO
cn_combo_scaffold_1103_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1389..3110)
DNA (1722bp) protein (574aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA24778.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA24778.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
Butyryl-CoA dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ74_PSEUX
cn_combo_scaffold_1103_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3107..3919)
DNA (813bp) protein (271aa)
Citrate synthase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46MN0_CUPPJ
Uncharacterized protein {ECO:0000313|EMBL:KDA06906.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
citrate synthase
cn_combo_scaffold_1103_4
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3916..4953)
DNA (1038bp) protein (346aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GMH8_9ACTO
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAB04803.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
acyl-CoA dehydrogenase
cn_combo_scaffold_1103_5
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4964..6118)
DNA (1155bp) protein (385aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RHX1_STRVP
putative acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCA54954.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (str
cn_combo_scaffold_1103_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6118..7176)
DNA (1059bp) protein (353aa)
HpcH/HpaI aldolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5S8_CONWI
HpcH/HpaI aldolase
HpcH/HpaI aldolase {ECO:0000313|EMBL:ADB52627.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (
cn_combo_scaffold_1103_7
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7239..8450)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037EE3E2
Amidohydrolase {ECO:0000313|EMBL:KIE52582.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
amidohydrolase 2
cn_combo_scaffold_1103_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8558..9805)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYL6_PSEUX
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26586.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_1103_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9901..10314
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM68_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22751.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1103_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10321..10923)
DNA (603bp) protein (201aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6T7_9ACTN
ThiJ/PfpI family protein {ECO:0000313|EMBL:CEL18459.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-
ThiJ/PfpI domain-containing protein
cn_combo_scaffold_1103_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10984..11745)
DNA (762bp) protein (254aa)
LuxR family transcriptional regulator (EC:1.1.1.100)
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA28429.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA28429.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRY5_PSEUX
cn_combo_scaffold_1103_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11845..14457)
DNA (2613bp) protein (871aa)
LuxR family transcriptional regulator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN67_PSEUX
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AEA26080.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_1103_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14545..15414)
DNA (870bp) protein (290aa)
Putative F420-dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRY6_PSEUX
F420-dependent oxidoreductase
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:AEA28430.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_1103_14
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15498..15794
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000376C691
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL89558.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
cn_combo_scaffold_1103_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15876..18653
DNA (2778bp) protein (926aa)
Transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ6_PSEUX
winged helix family transcriptional regulator
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA22344.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
cn_combo_scaffold_1103_16
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18592..18756)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TU87_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELB93873.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
cn_combo_scaffold_1103_17
unknown

Not on your lists

comp(18865..19029)
DNA (165bp) protein (55aa)

This feature has no annotations

cn_combo_scaffold_1103_18
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19227..19808
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037CC845
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:KDN19606.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamy
riboflavin biosynthesis protein RibD domain-containing protein
cn_combo_scaffold_1103_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19790..20125
DNA (336bp) protein (112aa)
YCII-related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G5_CONWI
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:ADB50929.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei
cn_combo_scaffold_1103_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20122..21294
DNA (1173bp) protein (391aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVI7_FRASU
ECF subfamily RNA polymerase sigma-24 subunit
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP82493.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain
cn_combo_scaffold_1103_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21316..21750)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUU0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26404.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1103_22
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21756..22070)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FHH5_MYCSM
Uncharacterized protein {ECO:0000313|EMBL:ELQ91196.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
cn_combo_scaffold_1103_23
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22070..23080)
DNA (1011bp) protein (337aa)
Amidohydrolase 2 n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FKS4_MYCSM
Amidohydrolase 2 {ECO:0000313|EMBL:ELQ91197.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
amidohydrolase 2 rbh
cn_combo_scaffold_1103_24
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23104..23859)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003831179
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP61237.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 549
cn_combo_scaffold_1103_25
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(23856..25376)
DNA (1521bp) protein (507aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-)
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:BAN04243.1}; EC=6.2.1.- {ECO:0000313|EMBL:BAN04243.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrob
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00036D24E8
cn_combo_scaffold_1103_26
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25423..25839)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI000364CB44
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:KJE78160.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferr
cn_combo_scaffold_1103_27

Not on your lists

comp(25859..26599)
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL94143.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cn_combo_scaffold_1103_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26599..27714)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A0A12
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative monooxygenase
cn_combo_scaffold_1103_29
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27867..28601)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MEQ2_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB97787.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;"
TetR family transcriptional regulator
cn_combo_scaffold_1103_30
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29086..30324
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI0003601841
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHL10717.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
putative ABC transporter substrate-binding protein
Displaying items 1-30 of 79 in total

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