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cn_combo_scaffold_2017

Alias: PSE51_15

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2017_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1242
DNA (1242bp) protein (414aa)
Parallel beta-helix repeat protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR41_PSEUX
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:AEA24099.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_2017_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1286..2773)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR39_PSEUX
histidine kinase
cn_combo_scaffold_2017_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2878..3405)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR38_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24096.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2017_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3395..3628)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR37_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24095.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2017_5
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3741..5006)
DNA (1266bp) protein (422aa)
rkpK; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXK0_MODMB
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KGH47008.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b
cn_combo_scaffold_2017_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5236..6063
DNA (828bp) protein (276aa)
Glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:AEA24094.1}; EC=2.7.7.33 {ECO:0000313|EMBL:AEA24094.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiacea
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR36_PSEUX
cn_combo_scaffold_2017_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6120..6746
DNA (627bp) protein (209aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR35_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA24093.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
cn_combo_scaffold_2017_8
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7134..7571
DNA (438bp) protein (146aa)
Lipoprotein n=3 Tax=Amycolatopsis mediterranei RepID=D8HYC6_AMYMU
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEK43414.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Noc
cn_combo_scaffold_2017_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7884..9365
DNA (1482bp) protein (494aa)
Polysaccharide biosynthesis protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR34_PSEUX
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA24092.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_2017_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9362..10315
DNA (954bp) protein (318aa)
Glycosyl transferase family 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR33_PSEUX
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA24091.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_2017_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10312..11574
DNA (1263bp) protein (421aa)
Polysaccharide pyruvyl transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR32_PSEUX
polysaccharide pyruvyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:AEA24090.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_2017_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11578..12159
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR31_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24089.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2017_13
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12174..13460)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6VN65_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB76825.1}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
hypothetical protein
cn_combo_scaffold_2017_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13457..14713)
DNA (1257bp) protein (419aa)
Glycosyl transferase group 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR30_PSEUX
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA24088.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
cn_combo_scaffold_2017_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14710..15945)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR29_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24087.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2017_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15948..17495)
DNA (1548bp) protein (516aa)
Lipoprotein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR28_PSEUX
lipoprotein rbh
Lipoprotein {ECO:0000313|EMBL:AEA24086.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
cn_combo_scaffold_2017_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17492..19486)
DNA (1995bp) protein (665aa)
Heparinase II/III family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR27_PSEUX
Heparinase II/III family protein {ECO:0000313|EMBL:AEA24085.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
heparinase II/III family protein
cn_combo_scaffold_2017_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19486..21693)
DNA (2208bp) protein (736aa)
Oxidoreductase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR26_PSEUX
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEA24084.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_2017_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21690..23636)
DNA (1947bp) protein (649aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEA24083.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AEA24083.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiac
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR25_PSEUX
cn_combo_scaffold_2017_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23651..24841)
DNA (1191bp) protein (397aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEA24083.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AEA24083.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiac
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR25_PSEUX
cn_combo_scaffold_2017_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24856..26181)
DNA (1326bp) protein (442aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AEA24082.1}; EC=1.1.1.132 {ECO:0000313|EMBL:AEA24082.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
Nucleotide sugar dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR24_PSEUX
cn_combo_scaffold_2017_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26184..26837)
DNA (654bp) protein (218aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR23_PSEUX
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA24081.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
cn_combo_scaffold_2017_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26834..28705)
DNA (1872bp) protein (624aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR23_PSEUX
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA24081.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
cn_combo_scaffold_2017_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28702..30240)
DNA (1539bp) protein (513aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR22_PSEUX
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA24080.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
cn_combo_scaffold_2017_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30478..31806)
DNA (1329bp) protein (443aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEA24079.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEA24079.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR21_PSEUX
cn_combo_scaffold_2017_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31818..33338)
DNA (1521bp) protein (507aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) rbh
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AEA24078.1}; EC=2.7.8.6 {ECO:0000313|EMBL:AEA24078.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonoc
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR20_PSEUX
cn_combo_scaffold_2017_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33951..35387)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR19_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24077.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2017_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35526..36056)
DNA (531bp) protein (177aa)
HNH endonuclease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR18_PSEUX
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEA24076.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
Displaying 28 items

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