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cn_combo_scaffold_2179

Alias: PSE51_20

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2179_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..688
DNA (687bp) protein (229aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA24634.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA24634.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX03_PSEUX
cn_combo_scaffold_2179_2
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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1325..2392
DNA (1068bp) protein (356aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IUZ0_PSEUL
C4-dicarboxylate transporter
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:BAK77492.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogul
cn_combo_scaffold_2179_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2389..6069
DNA (3681bp) protein (1227aa)
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:AEA26462.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26462.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
nitrate reductase subunit alpha (EC:1.7.99.4)
Nitrate reductase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW48_PSEUX
cn_combo_scaffold_2179_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6066..7715
DNA (1650bp) protein (550aa)
nitrate reductase subunit beta (EC:1.7.99.4)
Nitrate reductase, beta subunit {ECO:0000313|EMBL:AEA26463.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26463.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
Nitrate reductase, beta subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW49_PSEUX
cn_combo_scaffold_2179_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7712..8317
DNA (606bp) protein (202aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW50_PSEUX
nitrate reductase molybdenum cofactor assembly chaperone
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:AEA26464.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
cn_combo_scaffold_2179_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8314..9048
DNA (735bp) protein (245aa)
respiratory nitrate reductase subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:AEA26465.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26465.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardi
Respiratory nitrate reductase, gamma subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW51_PSEUX
cn_combo_scaffold_2179_7
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9054..11471)
DNA (2418bp) protein (806aa)
Putative integral membrane protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0H6_CELGA
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AEI11520.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain AT
cn_combo_scaffold_2179_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11504..12274)
DNA (771bp) protein (257aa)
Regulatory protein TetR n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H701_CELFA
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AEE44510.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DS
cn_combo_scaffold_2179_9
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12312..13913)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PNI2_9ACTO
Na+/H+ antiporter rbh
Na+/H+ antiporter {ECO:0000313|EMBL:ADH69167.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23
cn_combo_scaffold_2179_10
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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14532..15725
DNA (1194bp) protein (398aa)
cytochrome P450 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED1C
cyp49; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI12849.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain
cn_combo_scaffold_2179_11
unknown

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comp(15774..16082)
DNA (309bp) protein (103aa)

This feature has no annotations

cn_combo_scaffold_2179_12
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16218..16484)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000367B62D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ18671.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;
cn_combo_scaffold_2179_13

Not on your lists

comp(16481..17164)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT38_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:KKN82384.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
cn_combo_scaffold_2179_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17154..18608)
DNA (1455bp) protein (485aa)
Amino acid permease-associated region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT36_RUBXD
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ABG05442.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
cn_combo_scaffold_2179_15
unknown

Not on your lists

comp(18605..18817)
DNA (213bp) protein (71aa)

This feature has no annotations

cn_combo_scaffold_2179_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18814..19233)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT35_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG05443.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
cn_combo_scaffold_2179_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19238..19537)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT34_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG05444.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
cn_combo_scaffold_2179_18
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20019..21479
DNA (1461bp) protein (487aa)
Possible amino acid permease n=2 Tax=Rhodococcus RepID=Q0RYW5_RHOSR
amino acid permease
Possible amino acid permease {ECO:0000313|EMBL:ABG99521.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
cn_combo_scaffold_2179_19
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21476..22219
DNA (744bp) protein (248aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXR0_NOCFA
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD57031.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10
cn_combo_scaffold_2179_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22212..22946)
DNA (735bp) protein (245aa)
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLK2_PSEUX
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:AEA27055.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_2179_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23142..23822
DNA (681bp) protein (227aa)
Glutamine amidotransferase class-II n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLK3_PSEUX
glutamine amidotransferase
Glutamine amidotransferase class-II {ECO:0000313|EMBL:AEA27056.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_2179_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23810..24526
DNA (717bp) protein (239aa)
Glutamate synthase alpha subunit domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLK4_PSEUX
glutamate synthase subunit alpha domain-containing protein
Glutamate synthase alpha subunit domain protein {ECO:0000313|EMBL:AEA27057.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
cn_combo_scaffold_2179_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24557..25051
DNA (495bp) protein (165aa)
glutamate synthase (EC:1.4.1.13)
Glutamate synthase (NADPH) {ECO:0000313|EMBL:AEA27058.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AEA27058.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
Glutamate synthase (NADPH) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLK5_PSEUX
Displaying 23 items

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