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cn_combo_scaffold_3401

Alias: PSE51_46

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3401_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1696
DNA (1695bp) protein (565aa)
Heat shock protein 70 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI7_PSEUX
molecular chaperone DnaK
Heat shock protein 70 {ECO:0000313|EMBL:AEA28679.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
cn_combo_scaffold_3401_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1941..2237
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28678.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2288..3511
DNA (1224bp) protein (408aa)
Major facilitator superfamily mfs_1 n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CL70_MYXFH
Transporter, putative {ECO:0000313|EMBL:CEL15465.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4
major facilitator family transporter
cn_combo_scaffold_3401_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3551..4369
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28677.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_3401_5
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4422..4757
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XQE3_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR63876.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cy
hypothetical protein
cn_combo_scaffold_3401_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4876..5634
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWH4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28666.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_7
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5639..6796
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000367AFF2
Monooxygenase {ECO:0000313|EMBL:KGM03481.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
FAD-binding monooxygenase
cn_combo_scaffold_3401_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6849..7412
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H8C7_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL89264.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
cn_combo_scaffold_3401_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7536..9770
DNA (2235bp) protein (745aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
UvrD/REP helicase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKM4_PSEUX
UvrD/REP helicase
cn_combo_scaffold_3401_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9997..10419)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28663.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_11
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10424..11107)
DNA (684bp) protein (228aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces acidiscabies RepID=UPI000288A069
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJT63546.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus
cn_combo_scaffold_3401_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11157..12326
DNA (1170bp) protein (390aa)
Monooxygenase FAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWG9_PSEUX
monooxygenase FAD-binding protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AEA28661.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_3401_13
unknown

Not on your lists

comp(12387..13238)
DNA (852bp) protein (284aa)

This feature has no annotations

cn_combo_scaffold_3401_14
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13890..15017)
DNA (1128bp) protein (376aa)
Parallel beta-helix repeat-containing protein n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N112_9ACTO
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:EIF90709.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
hypothetical protein
cn_combo_scaffold_3401_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15274..16095)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27655.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16100..16927)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27656.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17053..17481
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27657.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17587..17976
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3401_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17973..18263
DNA (291bp) protein (97aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT4_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_3401_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18421..19911
DNA (1491bp) protein (497aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT6_PSEUX
DNA translocase FtsK rbh
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:AEA27661.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_3401_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19908..21602
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
hypothetical protein
cn_combo_scaffold_3401_22
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21599..21814
DNA (216bp) protein (72aa)
DNA-binding protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262761C
DNA-binding protein {ECO:0000313|EMBL:KDN19468.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
DNA binding domain-containing protein
cn_combo_scaffold_3401_23
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21814..22995
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037E845A
phage integrase
Phage integrase {ECO:0000313|EMBL:AIJ26861.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
cn_combo_scaffold_3401_trna_1
unknown

Not on your lists

comp(23085..23161)
DNA (77bp)
transferRNA
cn_combo_scaffold_3401_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23364..24482
DNA (1119bp) protein (373aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWG8_PSEUX
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AEA28660.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_3401_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24506..25087
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=675635 species="B
Deoxycytidine triphosphate deaminase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWG7_PSEUX
Deoxycytidine triphosphate deaminase
cn_combo_scaffold_3401_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25155..25925)
DNA (771bp) protein (257aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWG6_PSEUX
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:AEA28658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
cn_combo_scaffold_3401_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25922..26968)
DNA (1047bp) protein (349aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEA28657.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEA28657.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
Sulfate-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWG5_PSEUX
cn_combo_scaffold_3401_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27081..27647
DNA (567bp) protein (189aa)
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWG4_PSEUX
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AEA28656.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
Displaying 29 items

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