ggKbase home page

cn_combo_scaffold_4310

Alias: PSE51_72

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4310_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..808
DNA (807bp) protein (269aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH8_PSEUX
DNA polymerase LigD, polymerase domain-containing protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEA22576.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
cn_combo_scaffold_4310_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

805..1482
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, phosphatase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH7_PSEUX
HAD-superfamily hydrolase
HAD-superfamily hydrolase, phosphatase {ECO:0000313|EMBL:AEA22575.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_4310_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1454..2626)
DNA (1173bp) protein (391aa)
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:AEA22574.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AEA22574.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Alcohol dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH6_PSEUX
cn_combo_scaffold_4310_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2808..3794
DNA (987bp) protein (329aa)
pyridoxine 4-dehydrogenase (EC:1.1.1.65)
Pyridoxine 4-dehydrogenase {ECO:0000313|EMBL:AEA22573.1}; EC=1.1.1.65 {ECO:0000313|EMBL:AEA22573.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
Pyridoxine 4-dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH5_PSEUX
cn_combo_scaffold_4310_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3791..4189
DNA (399bp) protein (133aa)
Putative F420-dependent enzyme n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH4_PSEUX
F420-dependent protein
Putative F420-dependent enzyme {ECO:0000313|EMBL:AEA22572.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
cn_combo_scaffold_4310_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4320..4487)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22570.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_4310_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4540..5985
DNA (1446bp) protein (482aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA22567.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA22567.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Long-chain-fatty-acid--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNV5_PSEUX
cn_combo_scaffold_4310_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5985..6803
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNV4_PSEUX
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA22566.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_4310_9
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6873..8465
DNA (1593bp) protein (531aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPE4_METAC
serine-type D-Ala-D-Ala carboxypeptidase
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:AAM05372.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="
cn_combo_scaffold_4310_10
unknown

Not on your lists

comp(8902..9279)
DNA (378bp) protein (126aa)

This feature has no annotations

cn_combo_scaffold_4310_11
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9317..9883
DNA (567bp) protein (189aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WUC8_9NOCA
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein {ECO:0000313|EMBL:EME15343.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus
RNA polymerase sigma factor
cn_combo_scaffold_4310_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9973..11475)
DNA (1503bp) protein (501aa)
UPI0003C7E8AE related cluster n=1 Tax=unknown RepID=UPI0003C7E8AE
Uncharacterized protein {ECO:0000313|EMBL:KHD73549.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
cn_combo_scaffold_4310_13
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11552..13642
DNA (2091bp) protein (697aa)
UPI0003C7FFB4 related cluster n=1 Tax=unknown RepID=UPI0003C7FFB4
Uncharacterized protein {ECO:0000313|EMBL:GAC50818.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
hypothetical protein
cn_combo_scaffold_4310_14
unknown

Not on your lists

13752..14063
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 14 items

View Taxonomy