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cn_combo_scaffold_5048

Alias: PSE51_94

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5048_1
unknown

Not on your lists

comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

cn_combo_scaffold_5048_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91..327)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26545.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5048_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(324..557)
DNA (234bp) protein (78aa)
DNA binding domain protein, excisionase family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH2_PSEUX
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEA26546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
cn_combo_scaffold_5048_4
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

711..1067
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Saccharopolyspora erythraea D RepID=T2S2D1_SACER
Uncharacterized protein {ECO:0000313|EMBL:EQD86777.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
hypothetical protein
cn_combo_scaffold_5048_5
unknown

Not on your lists

1261..1743
DNA (483bp) protein (161aa)

This feature has no annotations

cn_combo_scaffold_5048_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1796..2704
DNA (909bp) protein (303aa)
Transposase IS4 family protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IYH0_9PSEU
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEB42655.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (str
cn_combo_scaffold_5048_7
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2781..3671
DNA (891bp) protein (297aa)
Tetratricopeptide repeat protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EXI8_9ACTO
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ELP63426.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies
hypothetical protein
cn_combo_scaffold_5048_8
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3609..3983)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0GZ59_STRA9
Cation tolerance protein CutA {ECO:0000313|EMBL:KDN23904.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.
cutA; Divalent-cation tolerance protein cutA
cn_combo_scaffold_5048_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4359..4736)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:AEA22969.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5048_10
unknown

Not on your lists

comp(4729..4923)
DNA (195bp) protein (65aa)

This feature has no annotations

cn_combo_scaffold_5048_11
unknown

Not on your lists

comp(5021..5422)
DNA (402bp) protein (134aa)

This feature has no annotations

cn_combo_scaffold_5048_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5432..5866)
DNA (435bp) protein (145aa)
Heat shock protein Hsp20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS01_PSEUX
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEA28445.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
cn_combo_scaffold_5048_13
unknown

Not on your lists

comp(6000..6302)
DNA (303bp) protein (101aa)

This feature has no annotations

cn_combo_scaffold_5048_14
unknown

Not on your lists

comp(6302..6580)
DNA (279bp) protein (93aa)

This feature has no annotations

cn_combo_scaffold_5048_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6577..6702)
DNA (126bp) protein (42aa)
Regulatory protein MerR {ECO:0000313|EMBL:AEA24529.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5048_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6903..7346
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626E63
hsp18; heat shock protein
Heat shock protein {ECO:0000313|EMBL:AIJ25606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
cn_combo_scaffold_5048_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7443..7883
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSS4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24527.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5048_18
unknown

Not on your lists

8160..8453
DNA (294bp) protein (98aa)

This feature has no annotations

cn_combo_scaffold_5048_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8532..8840
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM66_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22749.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_5048_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8822..9421)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22561.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5048_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9433..10413)
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU8_PSEUX
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEA22560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_5048_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10373..11218)
DNA (846bp) protein (282aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU7_PSEUX
AraC family transcriptional regulator
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA22559.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_5048_23
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11477..11662
DNA (186bp) protein (62aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2YTW4_9NOCA
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EME65390.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcu
CaiB/baiF CoA-transferase family protein
Displaying 23 items

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